CI01000299_05927821_05933216 (BLZF1)


Basic Information

Item Value
gene id CI01000299_05927821_05933216
gene name BLZF1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 5927314 ~ 5934832 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000299_05927821_05933216.mRNA
AGAACCATAACAACCGGTCCGGGCGAGTCGCTGGAAACAAGTGCTGAGCACTTCCGTTCCGCTGCTCATCAGTTCCGCCGCGATCAGCTGCTTCCGCTTTTGTCATGGATTCCGTGTGAGCGCGACACTGTGAGGTACGTGGCAAAATTTATTATGAAACATCATTATTTATCACTTAGTACGTTCATTAATGTCTTCGTGATTGTATTAGATTCTCGCCTTTACCTGATATAATGGGTTTAATAATCTAGAAGCGAGTGTTTGTTGTCTGACGCAAACTAGCCACAAACCAGATAAACAAAGAGAGATAAACGACACAAAGGTCGAGATTGTGTTCATCTGCATGTGTTTATGTTTTGGAGAAACTCATTTCTATACATAGACATCTATTGAGTTCACTGTAAGTTAACTAGTCGTGTTGAGTTGACTAATGTAAACATCTGTGGTCCTATTATACAATAATGAGGAATTAATCAGGTTTGATCAGTTCAAGACAATAAACCAGCTTTACTTCATTAATCCTGACTTACTAATGGTTATTTATTTCTTCTAGTCGTTTGATTTGTTATAGTTATATTCATATTTAAACAACACACCAGTGAACAAAAGAATTGCCAATGTGTTTATCTATCTATCTATCTATCTATCTATCTATCTATCATTGTATTTGTTTATTAAAATGCTATTTTTTCTGTGCAGGAGTCATCTGGACTTGCATCATAAAATGTTAATAAAAATATACATTTTTGTTTTAAAATAAAAAAAAAATGATTAAAATATTTTATAAATTGTAAAATATAAAATTAGTTTATTACAATGTAATTTTAATATAAACCATAAAAAATAAAATGTTATTTAAAATGTTATTTTATTATAAAAACTATAATATACAGTTTGTTAATTACAATGTTATTTTTTTATAAAATGTAAAAACAATTGTTTATTAAAATGTTATTTTATTATAAAATGTTTATTAAAATGATATTTTATTGCAATATTTAAAATATACAATTTGTTTATTACAATGTTATTTTTTATTATAAAACGTAAAAAATTATATATTATTTTTAATTTAAAATGTAAAAATATAATATTTATATATTTTTATTTTTAATAAAATTTGTTTATTAAAATCTTATTTTATTATAAATTTTAAAATGTAAAATTTGTTTATTACAATGTTATTTTTATTATACAATTTTAAAAAATGTTTATTAAAATGTTATTTTTCTTAAAATGTAAAAAATAAAATTTGTTTATTAATCTTATTTTTATTATAAAATGCAAAATTTGTTTATTAAAATGTTATTTTTATTATACAATTTAAAATATAAAATGTATTTATTACACTGTTAATTTTGTGCAGGGGTCTGGACTTGGATCATAAAATGCTAATAAAGTACATTTTTGTATAGAATTTGAAAAAAAAAAAAAGGTTTATTAATATATGAAAAGATTTTATTATTATAAAATAAATAAATGTGTGTATATATATATATATATAAATTATTTATTTATTTATTTTCTGTGCATGAGTCATCTAAAATGTTGCCACATAACATTTTAATAAAAAATCTAATTGTTTTCCGGCAGGCGGTAGATCGTGAAGGACAGTCATGTCTGCTGAAGTGATCATCAAAGATGTGGCTGTCCGCGGCCCCGGCGATGGCATGGAGACCTACAAGCCTCCGGCGGCCCCTGAGCTGTCGGTGGAGGCTCCGCTCCTGAAGCTGGCCTCTCCGAAGCGCAGTCCGAGAGCCGCGGCGCCGGGAGTTTTACACCTGGGGAAGGTGAGCAGGGACGCCTGCACGGAGGTGGAGGCCGTGAGGATCGTGGTTCCCCGGGCCGCTATCAGCCGGAGCGCTCGCGTGGGGCCTCACGCTGAAGACAGAGGGTCCCCTCAGCACGGGGACGAGCGTCCTCCCTCACCGGAGCCGCTGGACTACAGGAGCGCCCTGGAGAAACTGCAGAACTCAGAGCGCCGCCTGCTGCAGGATAAAGAGGGCCTGTCCAACCAGCTGCGCGTCCAGACAGAGGTGAACCGAGAGCTGAAGAAGCTGCTGGTGGCGTCGGTGGGCGATGACCTGCAGTATCACTTTGAGCGACTCGCGCGAGAGAAGAACCACTTGATCCTGGAGAACGAGGCTCTGGGACGGAGCCTGACGCACACGGCCGAGCAGCTGGAGCGCATGAGCATTCAGTGCGACGTCTGGAGGAGCAAGTTCCTCGCCAGCCGCGTGATGGCAGAGGAACTGACCAATGCCAGAGCAGCTCTGCAGCGGCAGACCAGAGACGCTCAGTGTGCGATTCAGGATCTGCTGCGAGAAAGAGACGAGTTCTCCAGAGACATGCTGCACACGCACAGGTCGCTGGAGCAGCTGCTGGTGTCTCTGCAGTGGGGTCGACAGCAGACGTATTATCCCAGCGCGCAGCCGCTCAGCACTGGAGAACTGGCTGCAGCCAATCACAAGCTTGCAGACGCCATCAACTCACATCTGCTGGGGAACGTGAGCGGCAGCGGCGGCCCGAAGAAGAGCCAGAACCAGACCCAGAGCCGGAACCAGACCCAGAGCCGGAACCAGAACCAGAGCCGAAGCTCAGAGCTCTGCAACACGCCAGCCGAGAAGATGGCCGAGAAGGTGCTGCGGAGTCTCGACCCCATTTCCTGCTCTGAACAGGAAGTCACCGCATCCCCGTCTGACCCGTCTCATTCCCCCTTCCTGCCCAGTAAGAAGAGCATCGGCCGCTTCCACCCGTACACACGCTACGAGAACATCACCTTCAACTGCTGCGAGCGCTGCAGCGGGGAGCTCACGGTGCTGTAGGCCGTCAGATCAACACACTCCAGTCAGTGTTATGATGGATACCAAAGACAAACCCTCATATCATCAGCGATCGTATCTCTATGGGATTCCCTGGGTCAGATATGGACGTGTCCGAGGTTTATTCCCCCTCATACTGTTTCACCCCTGCATGATTATATTTCTTCACTCAGAAGATGTTTAGCAGTGAAAGTGGACACAAACTGAGCTCCTAAATGACAAAATTAATTTTAGTGGATTATTCTTCTGCAGATTTTAAAATATAAACGGTGTAAGATGTTGTGTGTGTGTTTATGGCTCAGCGTGTCTGAATGCGGTGTAGGATGTGTTCATGTAATGCAGTGTTTCTGGAATATAATGCTGACTAACCCGTGACTGTATTTACACTGTTTCATACTTCAATATGAATCCAGGCACACATTTGAAGTGTTTCTGGACCAGAGTGTATAAAATCTTTGTTTTTAAAGCATTTCAGTGATATTTTCTATCATTTCCCTTTACCAAAATAAA

Function

symbol description
blzf1 Acts upstream of or within Golgi organization; cell-matrix adhesion; and muscle tissue morphogenesis. Predicted to be active in Golgi membrane. Is expressed in head; notochord; and somite. Orthologous to human BLZF1 (basic leucine zipper nuclear factor 1).

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000299_05927821_05933216.mRNA True 3332 mRNA 0.40 6 5927314 5934832

Neighbor

gene id symbol gene type direction distance location
CI01000299_05919510_05924061 TXNL4B, TXNL4B.S coding downstream 2686 5919128 ~ 5924628 (-)
CI01000299_05896205_05898855 NA coding downstream 28457 5896043 ~ 5898857 (-)
CI01000299_05856747_05860959 NA coding downstream 64328 5856716 ~ 5862986 (-)
CI01000299_05849494_05852270 NA coding downstream 74808 5849402 ~ 5852506 (-)
CI01000299_05831615_05835696 NA coding downstream 91506 5831391 ~ 5835808 (-)
CI01000299_05946615_05949088 NA coding upstream 11501 5946333 ~ 5949234 (-)
CI01000299_05974659_05985294 NA coding upstream 39559 5974391 ~ 5985606 (-)
CI01000299_06037407_06054548 TPP2 coding upstream 101385 6036217 ~ 6054548 (-)
CI01000299_06130943_06144384 NA coding upstream 194241 6129073 ~ 6144868 (-)
CI01000299_06145156_06154533 NA coding upstream 210123 6144955 ~ 6154533 (-)
G407848 NA non-coding downstream 151773 5774249 ~ 5775541 (-)
G407764 NA non-coding downstream 287448 5634840 ~ 5639866 (-)
G407734 NA non-coding downstream 372469 5552628 ~ 5554845 (-)
CI01000299_05457285_05462908 NA non-coding downstream 464142 5456864 ~ 5463491 (-)
G407827 NA non-coding upstream 10543 5945375 ~ 5946025 (-)
G407825 NA non-coding upstream 28848 5963680 ~ 5969556 (-)
G407881 NA non-coding upstream 83710 6018542 ~ 6023664 (-)
G407884 NA non-coding upstream 90193 6025025 ~ 6025802 (-)
G407885 NA non-coding upstream 91283 6026115 ~ 6026325 (-)
G407805 NA other downstream 91325 5835889 ~ 5835989 (-)
CI01000299_05428160_05443433 APP, APPA other downstream 471206 5427661 ~ 5443433 (-)
CI01000299_04913779_04927715 NA other downstream 998496 4913373 ~ 4927715 (-)
G407413 NA other downstream 1376593 4475994 ~ 4550721 (-)
CI01000299_06526127_06532048 CEP97 other upstream 597169 6526127 ~ 6532048 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_000020 blzf1 coding NC_007112.7 CM002885.2 494297 ~ 505620 (+)
rainbow trout (Oncorhynchus mykiss) blzf1 LOC106575890 misc NW_023493665.1 JAAXML020000242.1 1202037 ~ 1209051 (+)