CI01000299_06029307_06034445


Basic Information

Item Value
gene id CI01000299_06029307_06034445
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 6028957 ~ 6034956 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000299_06029307_06034445.mRNA
TTTTAAAAGCTGCTCTAGTTTATCTGATTGCACCTATTCCTTTTCACTTGCTTACTATTTAAGGTTCTGAAATACCTTGTTGTTGACGTTTCTCCAAATGCAAAGTCCTATTTTAAAAAAGATATGCTGATAATGTTATGCACTTCATTGTTTTTGTTACTTTATTTGAATTTTATCATTGTTTCTTGCATACATCATGAAGCAATCTGACAAAACAATGTTTGAGAAAATGTAGCATCAGTAGATATTAACAGGTCAACATAATAAAAATTGTTTTGTTTTAAATCAGTCCGTCCTGTCAACAAGCGGATATTATCATGGATTGTTGTCAGTCTGGAAATGCAGCAGAGATGGAGGAGAGCTTGAACACTGGGGAAGATGATACAGATGAAGTTGAAGTCCGTGTGCGTAAGGCATCCTGGGAGCCCGCTGTATTCTCCACCATTGGAAAGGAGATCCATTATTTCGCTGGTCATGAGATCAGAATCTGGGAGTCTCTTGATTCATTTGGTTCTGTCATCTGGCCAGGAGCTCTGGCTCTGTGTCACTACCTTGAGTCCAATCGAGCAACGGTTGATCTTCTTGACAAGGCGGTGCTAGAGATTGGAGCCGGCACGGGTCTCGTGTCCATCGTGGCCAGTCTGTTGGGGGGTTGGGTGACAGCAACAGACCTGCCGGAGGTCCTCGGGAACCTGAGATGCAACCTGTCCAGAAACACACGGGGCCGCTGCAGATACACCCCGCAGGTGGCGGAGCTCTCTTGGGGTTATGAACTCGATAAGACCTTCCCTCATTCAGTCTACAGATACGACTACATTTTAGCAGCCGATGTGGTCTATCATCATGACTTCCTAGCAGAATTACTGGTCACCATGCGCCACTTCTGCCAGCCCGGAACAACCCTCATATGGGCCAACAAGACCCGCTTCGATTCTGATCTATTTTTTTTGGAGAACTTCAAAAAAACGTTCAATACCACCCTGCTGGCAGACAACGGAGAGGTTAAAATTTACTCTGCCACCACAAGAGACGAAAGTGGACTAGCGACGTCAAAAGAGACCAAAGGGGTTGCGAGGAAAGGAGAGGACCAAGATGAAGCGGTCAAGAAAGAGTCAAAGCAAGAGATTATTGAAGGAAAGATTAAACTGACAGTAGAACAGATGCAAGAATATGAAAAGAAAAATGTGCAAAGGAAACCAGGGTATGCTGATTTGGAAAAACAGGAGGAAACATTAAATTTGGAGGATGGAAATGTGAACAGTATCAAAGAAGAAGAGGAGGACAACACAAACCTTGAAACTGAGGACAGTGGAGATGAAGAGAACGACGGCTGCTCTGAGATGGATTCAACATTAGTAGAGCAGAAATCTGAGGAAGGAAGCACAGAGAAAGAGTATGTGAGATCATGGGCACCGACTATTTACTACAGACCTGGGAAAGAAGTTTACAATTTTTTGGGACAGGAAATCACAATTCAGGAGTCAATCGATTCTTACGGTGCTACTATATGGCCAGCGGCACTTGCACTTTGCCGATTCTTAGAAACACCGCAGGGTCGTCAACAGATTGATTTACTTGACAAATCTGTACTTGAGCTTGGAGCTGGAACCGGCTTACTTTCGGTTGTCATCACGCTGTTGGGTGCCAAACTCACAGCTACGGATTTACCCGAGATTCTGAGTAATCTGACGTGCAACCTCAACAGGAACACGAGAGGCCGGCGGAGGCACGAGCCCCAGGTAGCAGAACTCTTCTGGGGTCACAAGCTGGACGAGACCTTCCCTAAATCCACACACCAATATGATTATGTGTTGGCGACTGATGTGGTCTATCACCACGACTTCTTGGCCGAGCTGCTGGTCACCATGCGTCACTTCTGCCAGCCAGGAACTACTCTTGTCTGGGCGAACAAGGTCCGCTATGCCTCAGATCTGGGCTTCATTGACAACTTCCTCAGATATTTTGATATCACACTGCTTGAAGAGTTGGATGATGTGAGGATTTATGTAGCAACCAGCAAGACACCAGAGAAGGAAGGTGACCAGGTTCAAGAGACGAGCGAGAAAGTGGAGGACAACTGTGACCTTGAGTCAAACAAGCAGGATGCCGGGGAACCAAACTCTTCAAGCGAGACAGGAAACAATGCAGAGGAAGTGGAACAAGAGCAGGAATGTGACAATACTCAGAGTTTAGAAAACATCAAAAAGGAGAAACAAGTAAAGGAGGAACTCCAGGATTCTGGAAGATCTGTGGAGGAAGAGGAAGAACTCCAGGATTCTGGAAGATCTGTGGAGGAAGAGGAAGAACTCCTGGATTCTGGAAGATCTGTGGAGGAAGAGGAAGAAGCTGAACCTGACAACACAGAACCAGCTGAACAGAGATCCTGGGCTCCCACTGTCTACTACAGTCATGGCAAGGAGATCTACTACTTTCTGGGTCATGAAATCAAGATTCAGGAATCCATAGACCATTATGGCAGCGTAGTATGGCCAGCGGCAGTGGCCCTTTGCCGATTCCTGGACACCGCAACAGGCCGACAGCAGATCAATCTACTTGACAAATCGACCCTGGAGCTTGGAGCAGGAACAGGCCTTGTCTCGATAGTTGCCACACTTCTAGGTGCTAAACTGACAGCCACAGATCTGCCAGAAATCCTTGGAAATCTGAGGTGCAACTTGAACCGGAACACCAGACAGCAGCGAAAACATGAGCCTCAGGTTACAGCATTGGCATGGGGCTACAAACTAGAGGAGATGTTTCCCCGCTCCACCCACCACTATGATTATGTATTGGCAGCTGATGTGGTCTATCACCACAACTGTCTCACTGAGCTTCTCGACACCATGCGTCACTTCTGCAGACCGGAGACAACTGTAATCTTTGCAAACAAGGTCCGGTATCAGTCCGACCTGGTATTTATAGAGAACTTTCAGAAAGCTTTTAACACCACATTACTGACAGAGCTGGATGAGAAGGCTTTCCAACCTACACTGCTGGCAGAGGTAGAAGAGGTGAAGGTCTGCATGGCTGTGGCGCATGGACGGCCGTTTGTTTAATGAACCACACTGTAGACAATTCCCATTTGTTTTAGAAACAATCTTTAGGACTGGATGACTGGCCAAATCCTTCTACAACAACGGTTTGGCAGTGATAATTGGACTGGCCAACTTACCAAATCTTCGTATACCTGCTATACGACATGTTGCGATTGACACGATCCTTTGAATCAGAAATTTTAATAAGATTTCAAACCACATAATGGCTGACCAAATAAGATTTTTTTTTACATTTCTGACTCAAATCAACTTATTTACCTGTGGTTTTGATTCATATTACAAAACATTTATTTAATGTTTTTGCCGTTTACACTAGTATATATGTGTGGTTTCAAGTGGTATTTTTTTGAGATCCATTGTTGAACAGTCAGATCAGAATTCACATTGTTTTTGTCATCTTTTAGTTTGACAGATTTGATTTAGACTGATTGAAAATAATAACAGTAATTCCTCCAGATGAAAAACAAATCTGAATTGTCTGCATTGTAAAGAAAAACATGCTGATGTTAAA

Function

NR:

description
Zgc:172067 protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000299_06029307_06034445.mRNA True 3567 mRNA 0.45 11 6028957 6034956

Neighbor

gene id symbol gene type direction distance location
CI01000299_06018839_06023448 NA coding upstream 5447 6018839 ~ 6023510 (+)
CI01000299_05988564_06002758 NA coding upstream 25936 5988095 ~ 6003021 (+)
CI01000299_05955084_05970603 NA coding upstream 57540 5954216 ~ 5971417 (+)
CI01000299_05935373_05943285 ERCC5 coding upstream 85544 5934903 ~ 5943413 (+)
CI01000299_05925030_05926229 NA coding upstream 102660 5924670 ~ 5926297 (+)
CI01000299_06074050_06097303 RASA3 coding downstream 39094 6074050 ~ 6097533 (+)
CI01000299_06100005_06114087 NA coding downstream 64761 6099717 ~ 6114463 (+)
CI01000299_06116505_06128180 GAS6 coding downstream 80682 6115638 ~ 6128450 (+)
CI01000299_06177821_06180061 NA coding downstream 142865 6177821 ~ 6180191 (+)
CI01000299_06217616_06220842 DCNL2, DCUN1D2, DCUN1D2A coding downstream 182660 6217616 ~ 6221071 (+)
G406220 NA non-coding upstream 3600 6025051 ~ 6025357 (+)
G406213 NA non-coding upstream 13310 6013408 ~ 6015647 (+)
G406427 NA non-coding upstream 80029 5948698 ~ 5948928 (+)
G406168 NA non-coding upstream 99028 5928182 ~ 5929929 (+)
G406417 NA non-coding upstream 128969 5899657 ~ 5899988 (+)
G406458 NA non-coding downstream 98887 6133843 ~ 6134043 (+)
G406463 NA non-coding downstream 100933 6135889 ~ 6136121 (+)
G406461 NA non-coding downstream 114643 6149599 ~ 6151122 (+)
G406470 NA non-coding downstream 148238 6183194 ~ 6183531 (+)
G406162 NA non-coding downstream 154823 6189779 ~ 6197674 (+)
G406244 NA other upstream 655378 5371181 ~ 5373579 (+)
G406096 NA other upstream 1101113 4924462 ~ 4927844 (+)
CI01000299_04703290_04704365 NA other upstream 1324332 4703071 ~ 4704780 (+)
CI01000299_04480751_04492829 NA other upstream 1523040 4480553 ~ 4493116 (+)
G405842 NA other upstream 1708816 4295533 ~ 4320141 (+)
G406161 NA other downstream 202882 6237838 ~ 6300508 (+)

Expression


Co-expression Network