CI01000299_06074050_06097303 (RASA3)


Basic Information

Item Value
gene id CI01000299_06074050_06097303
gene name RASA3
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 6074050 ~ 6097533 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000299_06074050_06097303.mRNA
GTGAAGCCAAGAACATCCCTCCTTATCCGGGTCCGAATAAAATGCGGGATTGTTACTGTACAGTGAACCTGGACCAGGAGGAAGTTTTCCGAACCAAAACCATAGAGAAGTCTTTGTGTCCATTCTACGGCGAGGACTTTTACTGTGAAATCCCGCGCAGTTTCCGCCATCTCTCCTTCTACATCTTTGACAGAGATGTGTTCAGGAGGGATTCCAGCATCGGTAAAGTGGCCGTGAAGAAGGAAGACCTTCAGAAATACCACGGTAAAGACCACTGGTTCCCGCTGCAGCCCGTCTGCGCAGACTCAGAGGTGCAGATAGACACACATCAGATCACAGATCTACTGCAGTACAGACCGGTTTGCACCGTAGTACCGCCCACCCCGAGTGTTTTCTGTGACTCATCAGCAGCCCGAACCCGGCAAAGACTCATGGGACCCTGCAGTCGTTCTTCATTGGTTTCTCTCCTCCGTCTCTCCCTCTCTTCGGGTGGCGGGAGTAACCATGGTAACGCTTCTCTCTCTCTCTCTCCTCCGCAGGGAAAGGTTCACCTGGAGCTGCGTCTCAGTGAGGTCATCACAGACAGTGGCGGCGTCTGCCACAAGCTGGCAACACGGGTTCTGGAGTGTCAGGATCTGCCGATTGTGAATGGCCAGTGTGATCCGTACGCAGCCGTGTCGTTACTGGGCCCCTCCAGGTCAGAGGCCAAGAAGACGAAGGTCAAGCGGAAAACCAACAATCCTCAGTTTGACGAGGTCTTCTTCTTTGAGGTGACCAAACCGCTGAGCTACACCAAACGACAGTTCGACGTGGAGGAGGACGACGTGGACAAGCTAGCGCTCAATAATGTAAGCGCAGACTCTCTTCTCAGGGTGGACCTGTGGAACGCCAGCAATCTGAAGTTCGGAGACGAGTTTCTGGGAGAGGTACGGGTGCAGCTGAAGGTGCTGGGACAGTCGGGTGTTCATGACGCATGGTACTTCCTGCAGCCCAGAGATAATGGCCATAAATCGGTGAAGGCTGATGAGCTGGGCTCGTTGCGGCTCAACATCGTTTACACGGAGGACCACGTGTTCCCCACGGAGCATTATAACCCGCTCCGTGACCTGCTGCTGCACTCCGCGCACGTCGAGGTCAGTGAGGTCAAGGCAAAGCCCGTCTCGGCGTCGGCGGCTCACATCTTGGGCGAGGCGTGCCGTGAGAAGCAGGAGGCGGCCGTACCGCTGGTGCGACTCTTCCTGCACTACGGCAAGATCGTGCCTTTCCTCAGTGCCATCGCACACGCAGAGATCAACCGCACGCAGGATCCCAACACTATATTCCGGGGAAACTCGCTCACATCGAAATGCATCGATGAGACCATGAAGCTGGCGGGGATGCATTACCTGCGGGTCACGCTCAAACCCATCATTGATGAGATCTGCGCCGACCACAAACCGTGTGAGATTGACCCCGTCAAGCTGAAGGAGTCGGAGAACTTGGACACAAACAGGGAAAACCTGCGTCAGTACGTTGACCGGATCTTCAACGCCATCACCAGCTCGGGTGTCAGCTGCCCGACGGTCATGTGTGACATCTTCTTCTCGCTGCGAGAGTCTGCGGCGTCACGCTTTCAAGTCGATCCGGATGTGCGGTACACGGCCGTCAGTAGTTTCATCTTCCTCCGCTTCTTTGCACCTGCCATCCTGTCACCGAGCCTCTTCCACCTGCGACCGCATCACCCGGATCCATGCACGTCTCGGACGCTGACGCTCATTTCCAAAACCATCCAAACTCTGGGAAGCCTGGCCAAGTCCAAATCTGCCAATTTCAAAGAGTCCTACATGGCCGCATTCTACGACTACTTCAATGAACAAAAGTACGCTGACGCAGTGAAGAACTTCCTGGATCTGATATCGTCCTCGGCTCGCTGGGATCAGAAGAGCATCGAGACGCCCATCATGCTGAAGGAAGGGAGCGTTAAACTCGTTATTAAGAGGTTTGATGCCAAGGGCTCTGGCAGGTTCATGATCAAACGAGCTCAAGGGCGAAACCGCTTCGGTCTGAAGAACTTCAAGAAGAGATGGTTCCGCCTCACGAACCACGAGTTCACCTACCATAAAACCAAAGGTAACGCAAAAGGTTTGTCCCAAACTCTCATTACAGGAGAGGGCGCTCTGTGCAGCATCCCTATAGAAAACATCCTGGCTGTGGAGAGACTAGAGGAAGAGTCCTTTAAAATGAAGAATATGTTCCAGGTCATCCAGCCAGAGAGGGCGCTCTACATCCAGGCCAATAACTGCGTGGAGGCCCGCGACTGGATCGACATCCTGACCAAGGTCAGTCAGTGTAACCGCAAGCGTCTGAGCACGTACCACCCGTCGGCCTACCTCAATGGACACTGGCTCTGCTGCAAGCTGTCGGCGGATGCGGCGCCCGGCTGTACGCCCTGCACGGGGGGACTTCCTGCCAACATCCAGCTGGACGTGGATGGAGACCGAGAGACGGAGAGGATCTACTCGCTCTACAGCACCTACATGTCCAAACTCGTGAAGATGCAGGAGGCGTGTGGCAGTAAGTCGGTGTACGACGGCCCGGAGCAGGAGGAATACTCCACATTTGTGATCGACGACCCGCAGGAGACGTATAAAACCCTGAGACTCGTCATCTCAGCCGTACAGACACTGGAGCAGCAGCACATGCAGTACAAACGCGACAAGTTCAGGAAAACCAAGTATGGAAGCCAGGAACATCCAATCGGTGATCAGAGCTTCCAGTGCTACATCCGCCAGCAGTCAGAAAGCTCCACCTACTCCATCTGACCACGCCCACTGCAGACTCTGCATGGCCTCCACAGCGACAGTTGTGATTGACAGGAAGGCGGCCACAGACGAAAGCTAACCGACAGCTTCCTCTGAACGGCGTCGGCCACGCACTTTATGCGTCACGCGCTCCGGTGGACGATGTAGCTTCGCCTCGCAGCGCGTTTTAACATTTCCTGATGTTTTTAAGCTAGAAGGCGGTAAGACGTCCTCTAGTTGTGGATGTTTTT

Function

symbol description
rasa3 Predicted to enable GTPase activator activity and metal ion binding activity. Acts upstream of or within blood vessel lumenization; nucleate erythrocyte differentiation; and thrombocyte differentiation. Is expressed in central nervous system. Orthologous to human RASA3 (RAS p21 protein activator 3).

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG:

id description
K12380 RASA3; Ras GTPase-activating protein 3

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000299_06074050_06097303.mRNA True 3031 mRNA 0.55 24 6074050 6097533

Neighbor

gene id symbol gene type direction distance location
CI01000299_06029307_06034445 NA coding upstream 39094 6028957 ~ 6034956 (+)
CI01000299_06018839_06023448 NA coding upstream 50540 6018839 ~ 6023510 (+)
CI01000299_05988564_06002758 NA coding upstream 71029 5988095 ~ 6003021 (+)
CI01000299_05955084_05970603 NA coding upstream 102633 5954216 ~ 5971417 (+)
CI01000299_05935373_05943285 ERCC5 coding upstream 130637 5934903 ~ 5943413 (+)
CI01000299_06100005_06114087 NA coding downstream 2184 6099717 ~ 6114463 (+)
CI01000299_06116505_06128180 GAS6 coding downstream 18105 6115638 ~ 6128450 (+)
CI01000299_06177821_06180061 NA coding downstream 80288 6177821 ~ 6180191 (+)
CI01000299_06217616_06220842 DCNL2, DCUN1D2, DCUN1D2A coding downstream 120083 6217616 ~ 6221071 (+)
CI01000299_06223295_06227054 ADPRHL1 coding downstream 125359 6222892 ~ 6227186 (+)
G406220 NA non-coding upstream 48693 6025051 ~ 6025357 (+)
G406213 NA non-coding upstream 58403 6013408 ~ 6015647 (+)
G406427 NA non-coding upstream 125122 5948698 ~ 5948928 (+)
G406168 NA non-coding upstream 144121 5928182 ~ 5929929 (+)
G406417 NA non-coding upstream 174062 5899657 ~ 5899988 (+)
G406458 NA non-coding downstream 36310 6133843 ~ 6134043 (+)
G406463 NA non-coding downstream 38356 6135889 ~ 6136121 (+)
G406461 NA non-coding downstream 52066 6149599 ~ 6151122 (+)
G406470 NA non-coding downstream 85661 6183194 ~ 6183531 (+)
G406162 NA non-coding downstream 92246 6189779 ~ 6197674 (+)
G406244 NA other upstream 700471 5371181 ~ 5373579 (+)
G406096 NA other upstream 1146206 4924462 ~ 4927844 (+)
CI01000299_04703290_04704365 NA other upstream 1369425 4703071 ~ 4704780 (+)
CI01000299_04480751_04492829 NA other upstream 1568133 4480553 ~ 4493116 (+)
G405842 NA other upstream 1753909 4295533 ~ 4320141 (+)
G406161 NA other downstream 140305 6237838 ~ 6300508 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_000915 rasa3 coding NC_007112.7 CM002885.2 357518 ~ 411331 (-)