CI01000299_06100005_06114087


Basic Information

Item Value
gene id CI01000299_06100005_06114087
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 6099717 ~ 6114463 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000299_06100005_06114087.mRNA
GAATAAAAACACAAACTGTTTTAACTGGAGAAATTAAGAGGATAAATTCATTATTTATCAAGAGCAAAATCAGCTTTAATTCCTGTTACATAATTCCCTGCCGGAGCACTTTCACCAGCTGAGGGCTACTAGTTGACCCATGGTTAACCCATACTTGTCAATCATGAGCTCGCTCGCGCTGCGCTTCTGGCCGAACTAGAGGAACGTGAGCGAGAAGAATCGAGCGTTTGAGTTCGGATCCGAACCGGAAGGCGTTTGGAGTGTGACTGACTGGATCAAACCGCGAGGATGAGGAGACTGAAGGCGGCGCGGAGCGGCTCTCTGCTCGGCCTCGTGCTGCTGCTGCTGAGCGCTGAACTCTGCGAGTCACACCGATTTCTTTCACAGAATAAAGCCTCTCAGTTCCTGCAGCGGCACAGACGCGCCAACACTCTGTTCGAGGAGAGCAAGAAGGGAAACCTGGAGCGCGAGTGCATCGAGGAGCTGTGCAATAAAGAGGAGGCGCGGGAGATCTTCGAGAACAATCTAGAAACGGAATATTTCTATCCCAAGTATGTTGTGTGTCTGGGCTCTCATCGCGTCGGGATCAATAATCCAAACTCCCCGAATCCAGGAATCCCACAGAACCTGCGCACCTGCGTTCAAGAGATCAGTAACCAGTGTCTGCCGCTGCCGTGTTATCAGGAGGGTTACGAGCGCTGTGTGGACGGTCAGGGTTCGTACACCTGTGTGTGTAAACCGGGCTGGAGGGGTCAGCGCTGTGACCAGGATATTAATGAGTGTGAAGACCCAGAATTCCATGCGGGCTGCAACCAAATTTGTTACAACCTCCCCGGGAGCTTCGTGTGCAGCTGTGAGAAGGGCTTCTACACACACGACAACATCCACTGCATCGATGAGTTTGAGCTGTTCCAGGAATTCTGGGATTTTCCTGTAAAGGAGAAACATGATTCCCTTCCAGCTGTGAGGTCCGTGTTCAGGAGGAAACCGCATCGACATATCAATGAGTGTATCCTGTTTCCCAGTGTGTGTGTGGAACCGTCTAAATGTGTCAACGCTCTGGGGTCGTTTGAGTGCCGCTGCCCGCTGGGATACCAGTACAACAGAACCTCACGCGAGTGTGTCGATCTGGACGAGTGTGAGCTGGACGTGTGCGGCGGCGAGTGTGTGAACACCATCGGCAGCTTCTCGTGTCACTGCGACGGACGGATGGGTGTGAAGCTGGCGGAGGACGGGCACCTCTGTGAGAAGATCCCGCAGTGTCTGGATCTGTACGACCACAAGCACGAGGAGATGCTGTATCTGGGAGAGCAGTTCTCCGGATTACCCGTCATTTACCTGCGCTTCCGTCTGCAGGCCGACACCAGGTTTGCAGCTGAATTTGATTTCCGCACGTTTGATCCGGAGGGAGTGATTCTGTACGCAGAGTCTTCGCCGGACTCGTGGTTCATGCTGGGTTTACGGAGCGGCCGCATCGAGGTCCAGTTCAAGAACGAACACTCCGTGAAAATGACCAGCGGAGGAAAAGCCATCAATGACGGACAGTGGCACGTGATCTCGGTGGAGGAGCTGATGGGAAGCGTCAGTGTGAAGATCAGTAAAGAGGCCGTCATGAGCATCAACAGTCCTGAGCGTCTCTTCACACCCGTCAACGACAAACTGGAGACGAAGATCAACCCGAGGCTGGACGGCTGCATCCGCGGCTGGAATCTGATGAATCAGGGCGGGTCTGGAGTGAAGGAGGTGATTCACGAGAAGGAGAGCAAGCACTGTTACGTGTATGTGGAGAAGGGCTCGTTCTTCAGCGGTGGAGGTCAGGCGCTCTTCAACATCAACTACAGCAGAAGCGGACAGTGGAAGGTGGATGTCGTGATGAGCATACGTCCGTCCAGCACCACCGGTGTATTATTCGCCTTGGTTACCAACAACACGGTCCCTCTGTCCGTTGCCGTGGTAACACGGGAAACCGATGATGCGGACCTGCAGGTGTTCGTGGACGGCGTCTGCGTGGCGACGCTGCAGTCTCTGATGTTGTGTTATCCGGATCGGATGGTGGTGGAGATGAGAGCGTCAGCCGATGGACTCCACATCACAGCGAACTCCTCGAACGTGACCTACAGCGACCCGGAGACCCTGAGCGAGGCTTTAGCTAAACTCGACCGCGCCATGCAGGGACCCGTCGACACTTACATAGGAGGACTTCCAGCGTTCTACCACGGCTGTCTGGAGATCCGTGTGGACGGACAGCAGCTGGACTTCGACGAGGCTGTTAGTAAAGACAACAGCATCAAGTCTCACTCCTGCCCTCCTGTTGATGCCCCGGACACGTCGTCCAGCGAATCCCAGCTGCAGTAGACAGGAAGTGACATCACAGGAGACACGTGACACGCTGCCTTGGTCTAAAGTTCCCATCAGACATGAAATCCGCCCTGGTTCTGGGTTCAACAGGGACGGAGAAAGCATGATGTTTCTTTTGTTTTAAATGAGTGTTTTAATTGATCCTAACCTGTGAAATTGTGAAAGAGCCTCTATTTAAACATGTGACAGACTTTCATCCTGATGGTTTTAGTATTTTTATTCCTGACGTGTCCGTTGTGTCTGTCGTTAATCAGGTTTTTTCTCTCAGTATAGAGCCGTCAGTTTTTATCTTGTATATAACACTAATTTTAATTTGATGTGAATATGTTTAGGTGGATACTGAACACTAGTGCCGCATTAATGCAAAAATTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000299_06100005_06114087.mRNA True 2731 mRNA 0.52 15 6099717 6114463

Neighbor

gene id symbol gene type direction distance location
CI01000299_06074050_06097303 RASA3 coding upstream 2184 6074050 ~ 6097533 (+)
CI01000299_06029307_06034445 NA coding upstream 64761 6028957 ~ 6034956 (+)
CI01000299_06018839_06023448 NA coding upstream 76207 6018839 ~ 6023510 (+)
CI01000299_05988564_06002758 NA coding upstream 96696 5988095 ~ 6003021 (+)
CI01000299_05955084_05970603 NA coding upstream 128300 5954216 ~ 5971417 (+)
CI01000299_06116505_06128180 GAS6 coding downstream 1175 6115638 ~ 6128450 (+)
CI01000299_06177821_06180061 NA coding downstream 63358 6177821 ~ 6180191 (+)
CI01000299_06217616_06220842 DCNL2, DCUN1D2, DCUN1D2A coding downstream 103153 6217616 ~ 6221071 (+)
CI01000299_06223295_06227054 ADPRHL1 coding downstream 108429 6222892 ~ 6227186 (+)
CI01000299_06233485_06239858 NA coding downstream 118109 6232572 ~ 6239902 (+)
G406220 NA non-coding upstream 74360 6025051 ~ 6025357 (+)
G406213 NA non-coding upstream 84070 6013408 ~ 6015647 (+)
G406427 NA non-coding upstream 150789 5948698 ~ 5948928 (+)
G406168 NA non-coding upstream 169788 5928182 ~ 5929929 (+)
G406417 NA non-coding upstream 199729 5899657 ~ 5899988 (+)
G406458 NA non-coding downstream 19380 6133843 ~ 6134043 (+)
G406463 NA non-coding downstream 21426 6135889 ~ 6136121 (+)
G406461 NA non-coding downstream 35136 6149599 ~ 6151122 (+)
G406470 NA non-coding downstream 68731 6183194 ~ 6183531 (+)
G406162 NA non-coding downstream 75316 6189779 ~ 6197674 (+)
G406244 NA other upstream 726138 5371181 ~ 5373579 (+)
G406096 NA other upstream 1171873 4924462 ~ 4927844 (+)
CI01000299_04703290_04704365 NA other upstream 1395092 4703071 ~ 4704780 (+)
CI01000299_04480751_04492829 NA other upstream 1593800 4480553 ~ 4493116 (+)
G405842 NA other upstream 1779576 4295533 ~ 4320141 (+)
G406161 NA other downstream 123375 6237838 ~ 6300508 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location