CI01000299_06177821_06180061


Basic Information

Item Value
gene id CI01000299_06177821_06180061
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 6177821 ~ 6180191 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000299_06177821_06180061.mRNA
ATGCCTGCTTATATGCCTGCTATTGCCTGCTTTTCCCCATATGCATCTAGCGACGCACCTTTAGTCAAACATGTTGTTCAGCTTGTTGACTCTCTAGTGTGCTTGTTTATGTGGAACAGTGTAGAAGAAAGTAAGGAAATTACAATGGAATTAATGAAGCTTTGGAAGTTTTCTTTCAGTGTAGCGAATGAAGAGCTCTTCAGACATGTGAAACATCTGTCAGTCTGTGTGCTGCTCCACAAACCTTCTGCTTCGACTCGCTTTGACCTGCAGACCAAACACACAAACTACCTGTCAGTAACATGGAGGATTTTCAATCTTTAATCTTACATTTAACGTATTTTAAGCATTTTAACATCACACACATCTCCTCTAAAGAAAATGTAAAGCAAACTGTATTTCAACAATCACACAGAAAACACATTATGCCATATATTTTCCCCTATTGTTTTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000299_06177821_06180061.mRNA True 454 mRNA 0.38 4 6177821 6180191

Neighbor

gene id symbol gene type direction distance location
CI01000299_06116505_06128180 GAS6 coding upstream 49371 6115638 ~ 6128450 (+)
CI01000299_06100005_06114087 NA coding upstream 63358 6099717 ~ 6114463 (+)
CI01000299_06074050_06097303 RASA3 coding upstream 80288 6074050 ~ 6097533 (+)
CI01000299_06029307_06034445 NA coding upstream 142865 6028957 ~ 6034956 (+)
CI01000299_06018839_06023448 NA coding upstream 154311 6018839 ~ 6023510 (+)
CI01000299_06217616_06220842 DCNL2, DCUN1D2, DCUN1D2A coding downstream 37425 6217616 ~ 6221071 (+)
CI01000299_06223295_06227054 ADPRHL1 coding downstream 42701 6222892 ~ 6227186 (+)
CI01000299_06233485_06239858 NA coding downstream 52381 6232572 ~ 6239902 (+)
CI01000299_06269853_06274289 PCID2 coding downstream 89411 6269602 ~ 6274393 (+)
CI01000299_06312445_06318421 NA coding downstream 131849 6312040 ~ 6318421 (+)
G406461 NA non-coding upstream 26699 6149599 ~ 6151122 (+)
G406463 NA non-coding upstream 41700 6135889 ~ 6136121 (+)
G406458 NA non-coding upstream 43778 6133843 ~ 6134043 (+)
G406220 NA non-coding upstream 152464 6025051 ~ 6025357 (+)
G406213 NA non-coding upstream 162174 6013408 ~ 6015647 (+)
G406470 NA non-coding downstream 3003 6183194 ~ 6183531 (+)
G406162 NA non-coding downstream 9588 6189779 ~ 6197674 (+)
G406478 NA non-coding downstream 26643 6206834 ~ 6207044 (+)
G406196 NA non-coding downstream 85563 6265754 ~ 6266230 (+)
G406142 NA non-coding downstream 99228 6279419 ~ 6286426 (+)
G406244 NA other upstream 804242 5371181 ~ 5373579 (+)
G406096 NA other upstream 1249977 4924462 ~ 4927844 (+)
CI01000299_04703290_04704365 NA other upstream 1473196 4703071 ~ 4704780 (+)
CI01000299_04480751_04492829 NA other upstream 1671904 4480553 ~ 4493116 (+)
G405842 NA other upstream 1857680 4295533 ~ 4320141 (+)
G406161 NA other downstream 57647 6237838 ~ 6300508 (+)

Expression


Co-expression Network