CI01000299_06322253_06326504 (CREG1)


Basic Information

Item Value
gene id CI01000299_06322253_06326504
gene name CREG1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 6322253 ~ 6326562 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000299_06322253_06326504.mRNA
TGGTCAGTCATGTTTCGCGCGCTGCTCGCGGTGTTTCTGGCGGTCGTTATCGCGCGTTGCGGTGCTCTGTCGGTTCCGCCGCATGAGGAGGTGGCTCGGATGGCTCGGTTCGTGGTCCACAAGTGTGACTGGGCTTCGATGGCGACGATCTCCACTCATGATCCGGTGAGAGGACAGCCGTTCTCCAACGCCTTCTCCATCAGCGACGGGCTCGCGGGCAACGGAACCGGAACCCCGTACATGTACCTGACACACATGGAGATCTCGGTGCAGGACCTGCAGACACACTACTGTAAGAACCACGGCTTCGACCCTCAGAGCCCTCTGTGCGCTCACATCATCCTGTCCGGCTCCGTGATGCAGGTGAACGACAGCGAGGCGTCCGTGGCTAAAGCCGCTCTGTTCGGCAGACACCCGGAGATGATCGACTGGCCCACTGACCACAACTGGTTCTTCGCCAAGTTCAACATCACTCAGGTGTGGGTGCTCGACTACTTCGGCGGAGTGAAGACCGTCACGCCGGAGGAGTATTACAGCGCCGCTCCGCACCGGACACACGCCGAGACACAGAGAGGGTCAGTGATGGCGTCGAGGGCAGCGTCCGCCGCGATCGTCCTGCTCTCGATGGCACCTGCGTCAGGATCCTCTCAGAGAAATCTGCTCAAGACCTCGAGCTGTAGACCAATTCAGCGTTTGACCTTTGGCCTCTCAAACTCTACAGCTTCAGACGTGGTGTTTTATCTCTCAGGGCTGAACGCTGCGGCCGTCTTTCATCCTCTCACTGCTTCTCGTGCCTCTGATTCGTCCCTTGATCCGTTCAGGAGCTTTTCAGTGTGTTTCCTCGCGTACGGCTCAAACATGTCAGATTGATCAAGCTAGAATAATGTTTTAAATGTGATTATTTGAAACTAAAGGCCAAACGCTGATT

Function

symbol description
creg1 Predicted to be located in extracellular region. Predicted to be active in extracellular space. Is expressed in blood. Orthologous to human CREG1 (cellular repressor of E1A stimulated genes 1).

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000299_06322253_06326504.mRNA True 928 mRNA 0.57 5 6322253 6326562

Neighbor

gene id symbol gene type direction distance location
CI01000299_06312445_06318421 NA coding upstream 3832 6312040 ~ 6318421 (+)
CI01000299_06269853_06274289 PCID2 coding upstream 47860 6269602 ~ 6274393 (+)
CI01000299_06233485_06239858 NA coding upstream 82351 6232572 ~ 6239902 (+)
CI01000299_06223295_06227054 ADPRHL1 coding upstream 95067 6222892 ~ 6227186 (+)
CI01000299_06217616_06220842 DCNL2, DCUN1D2, DCUN1D2A coding upstream 101182 6217616 ~ 6221071 (+)
CI01000299_06396938_06400105 NA coding downstream 70376 6396938 ~ 6401342 (+)
CI01000299_06416707_06422267 NA coding downstream 90145 6416707 ~ 6422648 (+)
CI01000299_06424909_06425694 NA coding downstream 98249 6424811 ~ 6425733 (+)
CI01000299_06430810_06434834 NA coding downstream 101489 6428051 ~ 6435178 (+)
CI01000299_06439603_06455258 ILDR2 coding downstream 113041 6439603 ~ 6455462 (+)
G406172 NA non-coding upstream 10554 6310408 ~ 6311699 (+)
G406142 NA non-coding upstream 35827 6279419 ~ 6286426 (+)
G406196 NA non-coding upstream 56023 6265754 ~ 6266230 (+)
G406478 NA non-coding upstream 115209 6206834 ~ 6207044 (+)
G406162 NA non-coding upstream 124579 6189779 ~ 6197674 (+)
G406494 NA non-coding downstream 65518 6392080 ~ 6392356 (+)
CI01000299_06541306_06541820 NA non-coding downstream 214700 6541262 ~ 6541985 (+)
G406161 NA other upstream 21745 6237838 ~ 6300508 (+)
G406244 NA other upstream 948674 5371181 ~ 5373579 (+)
G406096 NA other upstream 1394409 4924462 ~ 4927844 (+)
CI01000299_04703290_04704365 NA other upstream 1617628 4703071 ~ 4704780 (+)
CI01000299_04480751_04492829 NA other upstream 1816336 4480553 ~ 4493116 (+)

Expression


Co-expression Network