CI01000299_06362136_06376918


Basic Information

Item Value
gene id CI01000299_06362136_06376918
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 6362004 ~ 6377235 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000299_06362136_06376918.mRNA
AGATGTCTGCTGGTGGTTTACTTTGATTCAGGGCAAACGGTTTTGTCTGCAGAAATGATGCTGTCTGTGTGTGTAAATGCGATGTGTTTGTTTTTGTCATCTTGACCCACAGCAAACAAAAGCAGCTTATTTAGCAGCTAATTAACTGAGAGCTGGACTCTAGACGCCCATCTGGCCTTTGGTGGCGGCTGAAGTGACCTAATAAGGAACGTCTCCGAGCGCGTGTGGCCCGATCTGGCCGTCTGACCCTGTTCCAGCTCAGATTAGTGCCAGAAACCGCAGAGAGTCATTCGTAATCTTCATTCTTCATGGACAAGATGGGATGGAAATCTTTGAATTATAAAAGTAATTATTCTGTTTTAATTGCATTGACAGCTCGTGATTATGGGCCGATACTGAATCCTGTCGTGCTCTGGTGCGACAGACGCGTGATGCTGTACTTTCTGCTGCTGACGCTGCACTGGACGACGGTCACTGCGGCACTGCATCCGTCCACACGCGCCGCTGCCGCTGCCGCCGCCCTGCAGGAGGATGGATCAAGGCCGTATATTTACCACTGCCGATCGCCCAACATGGAGGTCTTCACCTGCTGGTGGCGTCCGATCAATAATCAGGACAACATTACCTACACGCTTCAGTACAGCACGGGGACTGGCGCTTCTCAGGACTGTCCCGATTACGTGAGCGGCGGCATCAACAGCTGCTTCTTCGACACCAAACACACTCAGGTCTGGGAGATGTACTGCATGAAAGTGACGGCCCACACTGGCACAGGGTCGCTGACCTCACAGAGACACTGCCTGGACGTGGCTGATATAGTGGAGACCGACCCGCCATTTAACCTGTCCTACATCATGCTGAACGAGAGCCACTGTGGATCCTGTCGCTCCATCATGCTGTCCTGGATGTATCCGGTCGAGTCTCAGGTGCGGGAGGGATGGATTACGCTCGTCTACGAGCTGCGCTACAGAAACCTCGCTCAGCCAGACACCTGGAAGATGAAGGAGCGTTTGCGGGAGCCTCATGTTGAGTTGTTGGATCTGCCGGTGGGAACGTATGAGTTCATGGTCCGGTGCCGCTCCGCCAACAGCAAACACTGGAGCGCATGGAGCGAGTCCATCAGCATCAGCATCATCGGCAGACCTCTGTCCGATCGCATGTTGGCCTTCATCCTGGTGACCAGCCTCAGCATCGTGGCCTTCCTCATCGTCGGTTTTGGGTTCATTCCACGAGGAAAGAGAATCAAAGCGTTTCTCCTGCCACCGATTCCCAAACCGCGCATCCGAGGGCTCGAACCCGTTCTGCTGAAGAATGGCAAGATCGATGAGATCAATCGTCATTTCTCCAGTTTTCACGGCTATAAGCCGCCGCAGTACTCTATGGAGACTTGGTACCAGGTCAGCGTGGACGCGTGTCCAGCTGTGGCGTCTAAAGAAGAGAACGCAGCTGTCGCTCAGTACGTCTCCGGCCCTGAAGGACAGCCGACCCCTCAGACGAGCTGCAGTCCTGCACCTTACTGCCGCAGCGGCCCCGCCTCCTACTGCGAGGGAGCCACACCTCCTCCAGCCCCTGGCCACACCCAACTGGAGCTCGTATCTGTCCCAGGCATGGACTACAGCATGATTCTAAACTCCGCCCCCGCGCAGCCGCCGTCGCAGGACTTCTACACGTGTGTCACCGGCGTGACGGCCAGCGGGGCGCTGCATCTGGTGCCCTGCCTGCCCGACATGCTGAAAAACACGCCCTATGTGCAGTTCAAAGAGGGCGCGGACGGCAGTGCGGACAAGAGCGGCCAATTGGCGGCGCTGCTGGAGAAGCAGATGGAGGAGCTGTCCTGCGACTCTGACCCGAGCGAAGCTGCCGTGCCTTTGCTACCTCATTCATCAGACTGAGCCTAAATCAGCGAACGCTCAGGACCTGCAGCAGCATAACGGACATGCGACGTACAATCACACACACACACACACACACACGGTCCACTACTGACACAGTCTGTGCGGGTTTGTCTTGAAATACAGAATAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000299_06362136_06376918.mRNA True 2024 mRNA 0.56 9 6362004 6377235

Neighbor

gene id symbol gene type direction distance location
CI01000299_06352251_06359190 DUSP27 coding downstream 1801 6351435 ~ 6360203 (-)
CI01000299_06337727_06341840 NA coding downstream 20164 6337139 ~ 6341840 (-)
CI01000299_06320613_06321046 NA coding downstream 40958 6320564 ~ 6321046 (-)
CI01000299_06310939_06311125 NA coding downstream 50775 6310939 ~ 6311229 (-)
CI01000299_06306931_06307410 NA coding downstream 54594 6306100 ~ 6307410 (-)
CI01000299_06476844_06477950 PRS23, PRSS23 coding upstream 98748 6475983 ~ 6479549 (-)
CI01000299_06497414_06502931 CK073, HIKESHI coding upstream 119921 6497156 ~ 6502931 (-)
CI01000299_06505676_06510021 EED, EED.S, EED.L coding upstream 128322 6505557 ~ 6510144 (-)
CI01000299_06516832_06521405 NA coding upstream 139360 6516595 ~ 6521405 (-)
CI01000299_06522084_06525262 NA coding upstream 144733 6521968 ~ 6525262 (-)
G407939 NA non-coding downstream 129729 6226412 ~ 6232275 (-)
G407923 NA non-coding downstream 139625 6220766 ~ 6222379 (-)
G407975 NA non-coding downstream 178469 6183135 ~ 6183535 (-)
G407971 NA non-coding downstream 216080 6145497 ~ 6145924 (-)
G407895 NA non-coding downstream 247514 6108478 ~ 6114490 (-)
G407986 NA non-coding upstream 12141 6389376 ~ 6389644 (-)
G407927 NA non-coding upstream 14809 6392044 ~ 6392356 (-)
G408001 NA non-coding upstream 39891 6417126 ~ 6432767 (-)
G408009 NA non-coding upstream 62286 6439521 ~ 6439736 (-)
G408010 NA non-coding upstream 63012 6440247 ~ 6440470 (-)
G407805 NA other downstream 526015 5835889 ~ 5835989 (-)
CI01000299_05428160_05443433 APP, APPA other downstream 905896 5427661 ~ 5443433 (-)
CI01000299_04913779_04927715 NA other downstream 1433186 4913373 ~ 4927715 (-)
G407413 NA other downstream 1811283 4475994 ~ 4550721 (-)
CI01000299_06526127_06532048 CEP97 other upstream 154766 6526127 ~ 6532048 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) G1517465 NA non-coding NC_048582.1 CM023236.2 12960141 ~ 12980331 (+)