CI01000299_06458969_06464458


Basic Information

Item Value
gene id CI01000299_06458969_06464458
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 6458075 ~ 6464695 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000299_06458969_06464458.mRNA
CTATTTAATGAGGGGGAAACAGCCACTAACACTGCTCCACAGACATTAGGGTCCGTTCCACTCATCTGAGGGTCAAAGGTGACCTCCAGCTCCCCCTCTCTGGATGTCATGGGTGGAGCTTTAAGGTCGGCCACATCCTAACCCTACCCCTATATTTAGCTCAAGCTCCACCCATCGACTGCAGAGCAGCAGTTTCTCCATGTTGAACCGCACTGAGATTCTGACACCACCTGCTGGTGACACGAGGAACTTCATCCACTTTACTGATCTGAAATCACGTGCTGGACGTTTACACTATCAACAAGCGAACATACTATAATATCGTTTATATATTATGTTGATATTAACATACTATTTATTCAAATATTTTCACTAAAAGTCTCGTCGTTTCGGTGTTGAGTGAGTGAAAGAGTTGTTTCTGCTGTAAAATCCTCTGACTCTCTCGGGCTGACAGGATTCTTCAAACACACGAGTTTGATCATCTGGATTGAGTTTTCTTCATGATGCGAGTTGGCTTGAACTGAGTTTCTCAAAGCCTGTGTTATAACGACAATAAAATCATGATAAAAGAGTCAAACTCTTCCAGAGCACACAGCAGCGCGGATCATGTAAGTTTCTCAGGCTGGTCGTTACCTGTGCGCACGCGCGTCATATGATGCACCTGTTTTGGGGTGGAGTAATGATGATGACGACGATGAAGGAGGAGGAAGAAGAGAGCGGAGGAAACACAAGCCGGTGTCTGGGAGGGTCACAACTACACGTTAAAGCGTCTTATGAGATAAAATGCAGTGTTGAACCCTAACCCGCGCTAACCCTAACCCTCATCCGTGACTTTATCACTTTTACACTCGCGCTGGTTTCGGTTCGCGTTCGCTGGAGTTTCATCGGATCATCATGAGGCGGATGGTCGTTTCGGTGCTGCTTCTGAGTCTCCTGATCTCAGAGAAACGCACGACTCTCTTTGCTTCGGTCATCTTGCGCTGTGATTTTTCCACCTCCTCGCAGCTTCAGAATGTGATGGTCACATGGAAGTTCAAGTCCTTCTGCAAAGATCCAGTTCTGGACTACTACTCCACAGCGTATCAGTCCGCCCTTCAGTTGGGTCAGGATCCTGCCAATGACTGCGTGGACTCGCAGCGCACCGTCCGAACCGTGGCTCAGAAACTAGGATCCAACGAGGCGGTGTTGGGCGCCGAGTACAGAGACCGCAAAGTCTACATTCAGAACAAGGCAGATCTGGTCATCAATGAGGTGATGTGGTGGGATAACGGGATGTATTTCTGTGCCGTGGAAGCACCTGGAGACACAGTCGGAGATTCAGACAAAGAGATGAAGCTGATCGTGTACCCGGTCATGCAGCACCGGCTGATGAAGGAGGCGCAGAAGGCCATGACGCCGTGGATGAACGGACAGCCGCTCTACGCACCCATGAGCAACCACAGCTCCTCTTACCAGATGAACCCCATGCTGTACGCAGGTTCAGCATCAGGGAAGGGTCACATGACGCCGGTTCCACTGCCGCCTCCACACATGTCCGTTAACATGCCGCCTCCCAGCATCCACGGCAATGGCAGCGTTCACGGGACCAACCAGGTGTTGGACTATCTGGAGGGTCAGGTGCGCGGCATGGATGTGAACGGCCCGCTCTTACAGCCGCAGCACATGTCGTCCCCTCCGCTGCACATGCCGCCCCCTCCGCAGCACATGCCGCAGCACGTCCCCTTCTCCGCCGGCCCTCCCAGCATGCTCTCCGGCCTGGATGATGGCCCCGCCTCACGCAGGTTCCCGCCCGGGTCACGAGGGGCAGGACGCTCCAGCGGCTCGTCTGCCTACAGCGCCTCACACCGCTACCCTCGGCCGGTCATTCCACGCAGCTACAGCCAGGAGGACGTCCTGGACAGCCGGAGCCAGTCCGGAGGATTCCGTCCCCGCTCGCGATCCAGGGACGATTTGCTGGCCTTCGATCACCGAGGCCCGTCCAGGCGGGATGATTATTCTCCTCCGCCCCACCGCGGCTCGTGGAGCTCGGCCAACGAGGAGAACAGCAGACACGGAGGTGCTCGAGGAGCTCGGGGAGGCGGATGGTCCGATCATCCGCCCACTTACAGCGAGTACGAGCCCGGGAAGAAGCCAGTCAAGCGGCCGGAGCGCTTCTCTGATAAGAGTTCTCGCAGCGGCACCAGCATCGTCATCTGAAGACCAGCATCTGGAAGCTTCTGTGTTCACGAACACACAATTGGTTTTACGGAACATATTTGAAGGATGTGATTCTTTGAACAAATCATGGATTTCTTTTTATATTTTTGTGCAGATCAGTTTATACACTTGAATGTGAATATGAATGAAAATCCTCTTCTAGTACATTATGACATTAGCTGTGGCGTTTCTTGGGTTTGAGGATTTATCTGTGTAAATATCAAGTCTTTTGTGTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000299_06458969_06464458.mRNA True 2433 mRNA 0.53 7 6458075 6464695

Neighbor

gene id symbol gene type direction distance location
CI01000299_06439603_06455258 ILDR2 coding upstream 2613 6439603 ~ 6455462 (+)
CI01000299_06430810_06434834 NA coding upstream 22897 6428051 ~ 6435178 (+)
CI01000299_06424909_06425694 NA coding upstream 32342 6424811 ~ 6425733 (+)
CI01000299_06416707_06422267 NA coding upstream 35427 6416707 ~ 6422648 (+)
CI01000299_06396938_06400105 NA coding upstream 56733 6396938 ~ 6401342 (+)
CI01000299_06466541_06475063 TMEM39A coding downstream 1846 6466541 ~ 6475639 (+)
CI01000299_06532144_06534604 RPL24 coding downstream 67449 6532144 ~ 6534631 (+)
CI01000299_06541306_06541820 NA coding downstream 76611 6541262 ~ 6541985 (+)
CI01000299_06556313_06564020 NA coding downstream 91618 6556313 ~ 6564237 (+)
G406494 NA non-coding upstream 65719 6392080 ~ 6392356 (+)
G406480 NA non-coding upstream 134452 6323185 ~ 6323623 (+)
G406172 NA non-coding upstream 146376 6310408 ~ 6311699 (+)
G406142 NA non-coding upstream 171649 6279419 ~ 6286426 (+)
G406196 NA non-coding upstream 191845 6265754 ~ 6266230 (+)
G406161 NA other upstream 157567 6237838 ~ 6300508 (+)
G406244 NA other upstream 1084496 5371181 ~ 5373579 (+)
G406096 NA other upstream 1530231 4924462 ~ 4927844 (+)
CI01000299_04703290_04704365 NA other upstream 1753450 4703071 ~ 4704780 (+)
CI01000299_04480751_04492829 NA other upstream 1952158 4480553 ~ 4493116 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location