CI01000299_06476844_06477950 (PRS23, PRSS23)


Basic Information

Item Value
gene id CI01000299_06476844_06477950
gene name PRS23, PRSS23
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 6475983 ~ 6479549 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000299_06476844_06477950.mRNA
AGACTGTGTTTTAGACCTTTGACCTTTGGCACAGAATGGCTGTTTTGTGACCTTAGTAACAGAGGTCTGGAACCCATTAACTGAAGAATTACAGTACAGTAGCGGCCAAAAGTGTCCGGCGTATGAAAATTGACACCCTAACCCTTTAACTGTTCATTATGTTTGAATAAAGATTTTGTAGTCATATTGTGTAGTTTTGCTTGGACTTGGTTGTTTGTTTACATAATTTTGATTTTGCCAGGCTGTTGTACAATGAAATTATGAATATGTGCAAGAACAAGAGAGAACCAACAAAATGTTGTTGTAGTCAATGTTTGCTTTTTTCCAGTGTTTAGTATTTTGGTCTTCCCTCAAATTTAAAATATTTACAAAAAATATAAAATATTTTCCTCATATTTTGATGGTCTAAACGAACTAGTAGGGTCATTATTTTCCCCATATTCTTGCAGCTGCTCTCTTCCCAGGCTGTGTTCCACTCCACTTTTAGACAGGCACTCACCAACTTCCCTAAGCACTTCCCCTCGGGGGAATCCCTGCCTCCATTTTGAAGTGTGTTCCACTTCTTGAAGTGGACGAGGGAAGTTTATATGGACAGACCCTCGTACCCAGAGGGAGCGAGTCTACTTCATATATACACTTCAAGCAGCTATATATCCCACAATTCAACTTGATTGTGACATCATAGCAGATCGCATTTAACTGAAGTGTATGATATATTAATTATTTTGAGAATTAATTGCATAATATATATTGTGTTGAGATTTAATCACATAATACTTGTAGCTACCTTATGTTCACAATTAAAGTTTATACTATTCTTTTTTTTTTATACCTATAGGAGTTTATATATTTTCTCCAACAACTTATATGCATATAGAATGGCGCATAAAAAAATTAGTGAAAAAATAAGTGAAAATGGGGTTTAAATAATAAATCAGCTCCATAGTGATCAAGAGCTTAGTGCATTTCATTTAAACCTTATGCACGAGTTCCGCCAGTAGTGGGCACTCATGCAACATAAGCAATGACGCAATGAGGCACTGAGGGTCCATGAGATTGAGAGAAGTACAATTTGGAGTGGAACACAGCCTCTGCCTGCGTCTCAATGTGCATCCTAAATAGTATGTGACATTAGTAATTTTCAATACTATTTAGGGCGGATAGTATGCACATCCAGTCTGTCAGTAACGCTGTTTAGTTCCTGTCTCTATGAAGCCCCTCCTTCTGAAAAGCACAATGTGCTCTGATTGGTCGACTGGAGAAGTGTGTTGTGTTTGGGAAATGTCCCGCCCCTTACCCTAACCGCCAGTTTCAACACACTACTATCTAACTCAACCAGGCCCCGCCCCTTTATTCTGCGTATGAATTATTTAAATGAGGAATATTGTGAAGAAAACTCAAGATGGAGGCGTTTCAGGAGTTCAGAAACACTGATATAGAGAAGAACTCCTGCTGGAGGAGCTTTGGAGAGCTTTTTCATGCTGAAAGAGCAAAACAGGGGAAAACAGCATCATAGGTCCTCTTTAACATCTTGTTTCACTCATTTTTAAGTAGTCTGCTAGAAGTTAAGACGTGTCTGCTTCTATCTCAGGTGTCTTCATGGCGTCCTTGCTTCGCCCCGCTCTGCTCACCCTCCTCCTCTGCGGTGCGGCCGGCTCGTCCCAGCGGCCTCAGTGGCCCGTCCAGCGTGTGCCCGTGGTTTGGCCGCAGCAGACGGAAGATCGGCCGCCGCCTCACTTCCTGCAGCCGGCTCAGCTGGAGGTGACCTCTTCCTGCGGGCCGGACTGCCACAAGCAAGCGCCTGCACCCAGCTACTGGGACCTGCGGCACTTTCTGTCCTACGAAACGCTGCATTCCAGCGGCCAGCTGACCGAGACGGCGGTGGGCATTTACGGATTTGATGCCAACAGTTTCTACAAGACGCCTGCCGTTCGCTCCAGATCCAAACGTCAGATCTTCGGCCACGACAGTCGCTTCAGTATTGTTGGGCAGGACTTCCTGTTGAACTACCCCTTCTCCACAGCCGTCAAGCTGTCGACCGGATGCTCGGGTACGTTAGTGGGCGATCGGCACGTGCTGACGGCGGCGCACTGCGTCCACGACGGCAAGAACTATGTGAAAGGAGCCCAGCGGCTGAGAGTGGGTTTCCTGAAACCACAGCAGAAAGATTCATCAGGCAGAAACGGCACCAGACCAGATAAGATGAAGTTCCAGTGGATCCGAGTGAAGCGCACACACGTGCCGAAGGGCTGGATAAAGGGCACCGCCAACGACATTGGCATGGATTATGACTACGCCCTGCTGGAGCTGAAGAAGGCACACAAACGGAGGCACATGAAGCTGGGCATCAGCCCCGTGGCCACGCAGCTGCCCGGTAAACGGGTGCAGTTCTCCGGGTTCGACAACGACCGGCCGGGTCAGCTGGTTTACCGCTTCTGCGAGGCCGGGGACGAAACCTATGACCTCCTGTACCAGCGCTGCGACGCTCAGCCGGGTGCCAGCGGGTCCGGAGTCTACGCCCGCATGTGGAGCCGCCGACGCCGGCGCTGGGAGCGTAAGGTCATCGGGATCTTCTCCGGACACCAGTGGGTGGATCTCAGCGGGACGCCTCAGGAGTTCAACGTGGCGGTGCGCATCACTCCCCTCAAGTTCGCCCAGATCTGCTACTGGATCAAGGGAAACTATGTGGACTGTAGAGAAGGTTGAGGAGCCGCCGACAGCTTTGCTTTCACTTTATTAGCACATAAGATACTCTTATTTCATGCAGGAGAGTTGCACAGTCCAGCAATACACAAGAACAATCATTAACTAACGAACTCTTTGGCTTAAAACACTTTAAGACACTTGTTTAGCCAAACAATACATATTGTACAAAAGTAAGGAAGGTTGTGCCAAAAAAATCTTTCTTCATTGATGCCCATTTAAACATAGCAAAGTAATGTTTTATGAGTGCCTGATTTTTATCTGAAGGCTCTTAAAGACAAAAGGGACCAACTTTATATCAAGTGTCTTTAACTACTATGTACATGCACTAATCATTTGATACAATTATTGTGTATGTTTTACATTGTACTTCTGCATATTCATTTATCCCACCCTTAAACCTTCCCATACCACCAAACCTGTCCTAACCTCACCCGTATCCCACCTTGATAGCAGCACAAGTGTTTGCAATACAACATCAACACAGTAAGCACATTGAACCTAACAATTATCTTTTATGAAAGTACAGTTAAAGACAGCTGATATATAGTGTGACCATTACAGGAATTATCAGAGCTCAGGAGACTGAAGGACTGAAGCAGCTGCCACAGATTCTGTCGACTCTTCTCGTTTTCTCTAATGTACTGAAGTCTGAATGTCATGCATACCTAATGTCTGAGAACTACTGTATGAGACACTGCTTTACAACCGTTTGTTTCCCTCTAGTGGTGAGAGACAGAACTGCAGATATCCACACTCACTGTAAATCAGTGGATATCAGCTCCTGATCGGCACTTTGACATTTATTCATTCTATGGCACTAATCATTGAGATTTTAAATGCCCTCTGTTACAAAACATTAAA

Function

symbol description
prss23 Predicted to enable serine-type endopeptidase activity and serine-type exopeptidase activity. Acts upstream of or within atrioventricular valve development; endocardium morphogenesis; and regulation of Notch signaling pathway. Is expressed in atrioventricular canal; atrium; cardiac ventricle; and pectoral fin. Orthologous to human PRSS23 (serine protease 23).

GO: NA

KEGG:

id description
K09627 PRSS23; serine protease 23

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000299_06476844_06477950.mRNA True 3567 mRNA 0.45 1 6475983 6479549

Neighbor

gene id symbol gene type direction distance location
CI01000299_06362136_06376918 NA coding downstream 98748 6362004 ~ 6377235 (-)
CI01000299_06352251_06359190 DUSP27 coding downstream 115780 6351435 ~ 6360203 (-)
CI01000299_06337727_06341840 NA coding downstream 134143 6337139 ~ 6341840 (-)
CI01000299_06320613_06321046 NA coding downstream 154937 6320564 ~ 6321046 (-)
CI01000299_06310939_06311125 NA coding downstream 164754 6310939 ~ 6311229 (-)
CI01000299_06497414_06502931 CK073, HIKESHI coding upstream 17607 6497156 ~ 6502931 (-)
CI01000299_06505676_06510021 EED, EED.S, EED.L coding upstream 26008 6505557 ~ 6510144 (-)
CI01000299_06516832_06521405 NA coding upstream 37046 6516595 ~ 6521405 (-)
CI01000299_06522084_06525262 NA coding upstream 42419 6521968 ~ 6525262 (-)
CI01000299_06526127_06532048 CEP97 coding upstream 46578 6526127 ~ 6532048 (-)
G407924 NA non-coding downstream 10798 6462457 ~ 6465185 (-)
G407937 NA non-coding downstream 16863 6458779 ~ 6459120 (-)
G407922 NA non-coding downstream 18754 6454093 ~ 6457229 (-)
G407946 NA non-coding downstream 22323 6452795 ~ 6453660 (-)
G407948 NA non-coding downstream 24605 6450662 ~ 6451378 (-)
G408021 NA non-coding upstream 9888 6489437 ~ 6489704 (-)
G408022 NA non-coding upstream 11638 6491187 ~ 6491512 (-)
G408023 NA non-coding upstream 12208 6491757 ~ 6492018 (-)
G408028 NA non-coding upstream 61736 6541285 ~ 6546201 (-)
G407805 NA other downstream 639994 5835889 ~ 5835989 (-)
CI01000299_05428160_05443433 APP, APPA other downstream 1019875 5427661 ~ 5443433 (-)
CI01000299_04913779_04927715 NA other downstream 1547165 4913373 ~ 4927715 (-)
G407413 NA other downstream 1925262 4475994 ~ 4550721 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) AMCG00014420 NA coding CM030128.1 CM030128.1 13450098 ~ 13451219 (+)