CI01000299_06497414_06502931 (CK073, HIKESHI)


Basic Information

Item Value
gene id CI01000299_06497414_06502931
gene name CK073, HIKESHI
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 6497156 ~ 6502931 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000299_06497414_06502931.mRNA
TGAATCTAGCGATGTTCGGCTGTTTAGTCGCTGGAAGACTGGTCCAAACGGACGCGCAGCAGGTCGCCTCTGATAAGTTCGTCTTTAATCTGCCGGACTGTGAGAATGTCAATCACGTGGTGGTGTTCATGCTGGGCACGGTGCCCTTCCCGGCTGGCATGGGTGGCGCGGTGTACTTCTCTTTCCCGGACCCTGCGGTCGGGCAGGTCTGGCAGCTGCTGGGCTTCATAACCAACGACAAGCCCAGTGCCATATTCAAGATCTCCGGTCTGAAAGCTGGTGAGGGCGGCGCTCATCCGTTCGGCATGATGACCGTCCCTCAGGCGCCGTCAGTTGCTCAGGTCGGAGTGTCGATCGAGTCTTTGGACCTTCTCGCACAACAAACGCCAGTGTCAAATTCAGCTGTTTGCACCGTGGACTCCTTCACACAGTTCACACAGAAGATGCTGGAGAGCTTGTACAACTTCACCTCCTCTTTTGCACTGTCTCAGTCTCAGATGACACCGAATCCTTCAGAGATGTACGTTCCTGCGAGCTCCATCCTTAAATGCACTTCTGTCATGATTCAAATCATTGCAATGTGTGAATATGAGCGCAATCATCTGTCGACTCTCTCGAGACTTTCCGACGACGATATCGATCATATTTGGTCGAGCGTGTCGTGTTTTATTGAAAAACAGATGTTCCTGCGAAAGGGGGTTTGTGTCTTCGGTCTGGGGACTTTCACATTCTGTCAGCAGAAACTGAACCTCGGAAACAAACATATCCTCATACAGAGACCCGTTTTCATCCTGTCAGAGAAACTCTCTCAGTATTACGGGCTCAAACAGATCAAACCACAGGCTACAGTTCAGTCATTAGAAGCAGAACTAACGCGCGTCTCCTCAGACGTGCCCGTGGTGCCGCTCAACTTCTCGGCCGTGAGCGCGCAGAGCCCGTACGACAGAGACGCGGTGGAGGGATGTGTGCGCGAGACGCTCCATCTGCTGCTCCGCGCCGCGTGCGCGCGACAGTCTGTCCTTCACACCTTCCCTGGGATCGGCGTTCTCGCATTCCGGCAAAGCCGAGTCAAGATGATGTTCTACCGTGACTTTATCTCAGCTGTAGACGGCACTGGGAAACTTTCAGCAGCTTTAACTAACAGACTGGAAACAAGTAACGGTGGAGCATCTGAGAGACCTTCGAGCTTCACACTGCCCTCCATATCTGCAGGAGAACCGCTGAGAGAAGAGCCGCCAGCGGCCCGTCACACTGACCGTGATGATGGACGGGAGAGTCGGCCGGCAGCCGGAGAGACGGAGACTGACCTCACAGACGGGCTGCTGGACAAGAGTCCGTCAAACACTGACCGGTACATTTCAACAGAAGACGATGAAGATTCAGCTGAATTACATTATAATATTACACATTTAAATAGAATTCCTTATCATCACAAAAACACTGTTCAAAATCCCACTGGATGGAAAAACTTTCCAGACTGAAATGGTCTCTTTCTTGTTTCCATCTACTTAGAGTAATGACAGAAAAGGCGCTCAGATAAATCACATGACTAACCTCAGAATAGAGGCTTTATGTTACGCGCCATTCATGCAAACTCCGTGTGTGGCCGCAGAGTTCAGATGTCCGTCAGGAGAAAGTTCTCTTTAGTGATGATCAGTTTGAATGAATGAAATGTGAGCTTTAAAGCTGAAACTCAAAACTGGACTGTCAGTTTCTCCTCACAGCACAAATGCATTAAA

Function

symbol description
hikeshi Predicted to enable Hsp70 protein binding activity and nuclear import signal receptor activity. Predicted to be involved in cellular response to heat and protein import into nucleus. Predicted to act upstream of or within protein transport. Predicted to be located in cytoplasm. Predicted to be active in cytosol and nucleus. Human ortholog(s) of this gene implicated in hypomyelinating leukodystrophy 13. Orthologous to human HIKESHI (heat shock protein nuclear import factor hikeshi).

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000299_06497414_06502931.mRNA True 1739 mRNA 0.51 10 6497156 6502931

Neighbor

gene id symbol gene type direction distance location
CI01000299_06476844_06477950 PRS23, PRSS23 coding downstream 17607 6475983 ~ 6479549 (-)
CI01000299_06362136_06376918 NA coding downstream 119921 6362004 ~ 6377235 (-)
CI01000299_06352251_06359190 DUSP27 coding downstream 136953 6351435 ~ 6360203 (-)
CI01000299_06337727_06341840 NA coding downstream 155316 6337139 ~ 6341840 (-)
CI01000299_06320613_06321046 NA coding downstream 176110 6320564 ~ 6321046 (-)
CI01000299_06505676_06510021 EED, EED.S, EED.L coding upstream 2626 6505557 ~ 6510144 (-)
CI01000299_06516832_06521405 NA coding upstream 13664 6516595 ~ 6521405 (-)
CI01000299_06522084_06525262 NA coding upstream 19037 6521968 ~ 6525262 (-)
CI01000299_06526127_06532048 CEP97 coding upstream 23196 6526127 ~ 6532048 (-)
G408023 NA non-coding downstream 5138 6491757 ~ 6492018 (-)
G408022 NA non-coding downstream 5644 6491187 ~ 6491512 (-)
G408021 NA non-coding downstream 7452 6489437 ~ 6489704 (-)
G407924 NA non-coding downstream 31971 6462457 ~ 6465185 (-)
G407937 NA non-coding downstream 38036 6458779 ~ 6459120 (-)
G408028 NA non-coding upstream 38354 6541285 ~ 6546201 (-)
G407805 NA other downstream 661167 5835889 ~ 5835989 (-)
CI01000299_05428160_05443433 APP, APPA other downstream 1041048 5427661 ~ 5443433 (-)
CI01000299_04913779_04927715 NA other downstream 1568338 4913373 ~ 4927715 (-)
G407413 NA other downstream 1946435 4475994 ~ 4550721 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location