CI01000299_06532144_06534604 (RPL24)


Basic Information

Item Value
gene id CI01000299_06532144_06534604
gene name RPL24
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 6532144 ~ 6534631 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000299_06532144_06534604.mRNA
GGTCGAGCTGTGCAGTTTTAGTGGATATAAAATCTATCCCGGTCATGGCCGGCGGTACGCCAGGATCGATGGAAAGGTTTTCCAGTTCTTGAATGCTAAATGTGAGTCTGCGTTCCTGTCCAAGAGGAACCCCAGACAGATCAACTGGACCGTTCTGTACCGGCGCAAACACAAGAAGGGCCAGTCTGTGAGTTTGACCCCTTCAGCTCTCTGTAGAGTCACATGCTTGCCGGACCCCTTTTATTTGTTTGACTGTACTGAAGAGGTGTCTAAGAAGCGCACGCGGCGCGCGGTGAAGTTCCAGCGGGCGATTACCGGCGCGTCTCTGGCTGAGATCCTGGCCAAGAGGAACCAGAAGCCTGAAGTGCGTAAAGCGCAGAGAGAGCAAGCCATCAGGGCTGCCAAGGAGGCCAAGAAGGCAAAGCAGGCGACTAAGAAGCCGTCCGCCCAGAGCACCAAGGCCCCTGCTAAAGCTGCACCAAAACAGAAGATTGCCAAGCCCATGAAGGTCAGCGCCCCTCGCGTCGGTGGCAAGCGTTAAGCTCATGTTTTGGTGTTTTGTGCGTTA

Function

symbol description
rpl24 Predicted to enable mRNA binding activity. Predicted to be a structural constituent of ribosome. Acts upstream of or within chordate embryonic development. Predicted to be located in ribosome. Predicted to be part of cytosolic large ribosomal subunit. Is expressed in endodermal cell; intestine; liver; and pancreas. Orthologous to human RPL24 (ribosomal protein L24).

GO:

id name namespace
GO:0003735 structural constituent of ribosome molecular_function

KEGG:

id description
K02896 RP-L24e, RPL24; large subunit ribosomal protein L24e

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000299_06532144_06534604.mRNA True 568 mRNA 0.55 5 6532144 6534631

Neighbor

gene id symbol gene type direction distance location
CI01000299_06466541_06475063 TMEM39A coding upstream 56505 6466541 ~ 6475639 (+)
CI01000299_06458969_06464458 NA coding upstream 67449 6458075 ~ 6464695 (+)
CI01000299_06439603_06455258 ILDR2 coding upstream 76682 6439603 ~ 6455462 (+)
CI01000299_06430810_06434834 NA coding upstream 96966 6428051 ~ 6435178 (+)
CI01000299_06424909_06425694 NA coding upstream 106411 6424811 ~ 6425733 (+)
CI01000299_06541306_06541820 NA coding downstream 6675 6541262 ~ 6541985 (+)
CI01000299_06556313_06564020 NA coding downstream 21682 6556313 ~ 6564237 (+)
G406494 NA non-coding upstream 139788 6392080 ~ 6392356 (+)
G406480 NA non-coding upstream 208521 6323185 ~ 6323623 (+)
G406172 NA non-coding upstream 220445 6310408 ~ 6311699 (+)
G406142 NA non-coding upstream 245718 6279419 ~ 6286426 (+)
G406196 NA non-coding upstream 265914 6265754 ~ 6266230 (+)
G406161 NA other upstream 231636 6237838 ~ 6300508 (+)
G406244 NA other upstream 1158565 5371181 ~ 5373579 (+)
G406096 NA other upstream 1604300 4924462 ~ 4927844 (+)
CI01000299_04703290_04704365 NA other upstream 1827519 4703071 ~ 4704780 (+)
CI01000299_04480751_04492829 NA other upstream 2026227 4480553 ~ 4493116 (+)

Expression


Co-expression Network