G403714


Basic Information

Item Value
gene id G403714
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 93601 ~ 116099 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU464056
ATCTGCATCATAGTTTCCACTTATAACCGAATCTGTGCTTGGAGTACTGCAGCGGTAGGTGGCGCTGTCACTAACTCGAGCCTCTTGAATTCTCAGTTCCACTGCGTTGTCCTCTAGTCGTGAAACACTAATGTCCCCGCTCCTTATGCGGTCCTGAAAAGAGTGATCTGAAAATGCTTCGTCCAATGTTGAGATCACTTTGATGGATTCTGTCCCTCGCGTTACTGTCCAATCGAAGTCCTGCTCCCTGGGGCCCTCGTAGTCCGATACATCACAGCGAATAGACAGCGGCTGGCCCTCGACCCGGAGCAAAGGGTCCCTAGACACGGTCACCAACCTGCAGTGGCATAAACCGACAGCGGCGTACAGCAGGATCAGAGCTTGCGTCTTTCCCATGTCGCTGGAGACGCGCGGTCCAACGCTTTATTCCTGATATGAGCTGAAGACAGACTGCAGGAAAGACAGACAGGTTCAGGATTCACCTGCGATGATCAGGAGACCCTCGCTGTGATGATGTCAGGATCGCAGTTTGAGCGCGAACGTGAGATGACTGACTGGACTCTTCTACCGCGCGCGCACGCGCCCGTGATTGATTCACGCTCTTTGAGGTTTAACGGCCGA
>TU464060
TGACAGTCACTTCCCCCATCTCCATTGTCTTCTCCTGAATTCGGTTCCAGACTCCTTGCTCTCTCGTCCACAGTCTGGCCGAGCACACGTACATCCCTTGATCTTCCGGCATCGCTCTGGAGAGCACTAGACTGTGCGAGACTCCGTTTCCCATTTCTAGACGCATCCCGCCATCTGTGTAGCGCCACGTGAAGTTGTCGCCAACCGTCATACTCAAATCTGGGCCAAAGGTCAGCAGGTCCTCTAGTAGAGACGAGCCCTTCTTGACTGACCAGGTTAAAGACAGGTAAATTCCTTCGATGAAGTTGCGGGAGACATTGCACAGGAGTCTAATGGATCCTCCCTCAGGAACGACAGGGTTTGGGGTGTCGGGTGCCACAATAAGACTGTTAGGAACAACTTGCAGCTGGACATCTGCATCATAGTTTCCACTTATAACCGAATCTGTGCTTGGAGTACTGCAGCGGTAGGTGGCGCTGTCACTAACTCGAGCCTCTTGAATTCTCAGTTCCACTGCGTTGTCCTCTAGTCGTGAAACACTAATGTCCCCGCTCCTTATGCGGTCCTGAAAAGAGTGATCTGAAAATGCTTCGTCCAATGTTGAGATCACTTTGATGGATTCTGTCCCTCGCGTTACTGTCCAATCGAAGTCCTGCTCCCTGGGGCCCTCGTAGTCCGATACATCACAGCGAATAGACAGCGGCTGGCCCTCGACCCGGAGCAAAGGGTCCCTAGACACGGTCA
>TU464061
TCCGCAGCCTTGTACCATCGTCCACTATCGTGCTGAACCCACATGCTCACTTTACATGAATAGAGTCCAGCGTCAGACATCTCCACACCGTGAACTTTGATTTGGAAATCCCACTTCCCCAAGCGTCTCACGTCCACCACATCAGATGTGTTGGTCAGCACGCCGTCACGACTCAGGTGGGCCAGAGTACGGCTGGCGTTCAACAGCCACGTCACTTCCAGGTCAATGGACGCCGCGGAGTCAGCAGAGACCGAACAGGTGAGGAGCAGCGTTTCTCCTGTGGATAATGTGCTGCCGTCCTGCACGTGAACAGTCAGGGAGTTCGCTGTTGGAGTGACAGTCACTTCCCCCATCTCCATTGTCTTCTCCTGAATTCGGTTCCAGACTCCTTGCTCTCTCGTCCACAGTCTGGCCGAGCACACGTACATCCCTTGATCTTCCGGCATCGCTCTGGAGAGCACTAGACTGTGCGAGACTCCGTTTCCCATTTCTAGACGCATCCCGCCATCTGTGTAGCGCCACGTGAAGTTGTCGCCAACCGTCATACTCAAATCTGGGCCAAAGGTCAGCAGGTCCTCTAGTAGAGACGAGCCCTTCTTGACTGACCAGGTTAAAGACAGGTAAATTCCTTCGATGAAGTTGCGGGAGACATTGCACAGGAGTCTAATGGATCCTCCCTCAGGAACGACAGGGTTTGGGGTGTCGGGTGCCACAATA
>TU464055
AGCAAAGCTGACTTTAAGCGCTGGGGTCAGATACTCTGCAACCTTTTTCCAGTTCCCATGATGAGTCGGGATCCACGCCATTACGGCACATGCATATTCTCCAGCGTCTGCGTCAGTCGTGTGAAGGAGGCGGAGCTTGAATGTGGAAGGTTCCGTTCGGGTCGCTGTAATAAGCCCTGCCTGTATGCGGCTCTTGTACATCTTGCCTGGCACAAGGGTTCCGTTCTCATCTAATGACGCGATAGTCTGAGTAGATACTGGAACGTTACCGGGCAGAGCGTCTCTGTACAGCCACGACACTCCCAACTGTCCGCTACGAAGGTTGGACACGTTCGTAACTTTGCATTCCAACTCCGTCGGTTCACCGAAGAACTTTGCGTTCACAGATGAATTTAGAACAACGGTGTATTCTGGAATTTGCTTAATAACGTGAACTCGTACAGGGTCAGAAATCTTCTCCGCAGCCTTGTACCATCGTCCACTATCGTGCTGAACCCACATGCTCACTTTACATGAATAGAGTCCAGCGTCAGACATCTCCACACCGTGAACTTTGATTTGGAAATCCCACTTCCCCAAGCGTCTCACGTCCACCACATCAGATGTGTTGGTCAGCACGCCGTCACGACTCAGGTGGGCCAGAGTACGGCTGGCGTTCAACAGCCACGTCACTTCCAGGTCAATGGACGCCGCGGAGTCAGCAGAGACCGAACAGGTGAGGAGCAGCGTTTCTCCTGTGGATAATGTGCTGCCGTCCTGCACGTGAACAGTCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU464056 False 621 lncRNA 0.53 2 93601 97785
TU464060 False 744 lncRNA 0.52 2 97454 100533
TU464061 False 717 lncRNA 0.54 2 100151 104486
TU464055 True 774 lncRNA 0.52 2 104170 116099

Neighbor

gene id symbol gene type direction distance location
CI01000299_00169255_00170695 NA coding upstream 53124 169223 ~ 170986 (-)
CI01000299_00185106_00209299 NA coding upstream 68675 184774 ~ 209299 (-)
CI01000299_00448948_00449565 NA coding upstream 332764 448863 ~ 449757 (-)
CI01000299_00452374_00452868 NA coding upstream 335242 451341 ~ 452868 (-)
CI01000299_00670925_00672195 NA coding upstream 554581 670680 ~ 673625 (-)
G403725 NA non-coding upstream 16514 132613 ~ 136933 (-)
G403737 NA non-coding upstream 117941 234040 ~ 234262 (-)
G403772 NA non-coding upstream 123438 239537 ~ 239755 (-)
G403738 NA non-coding upstream 124114 240213 ~ 240461 (-)
G403773 NA non-coding upstream 125051 241150 ~ 242770 (-)
G404372 NA other upstream 954508 1070607 ~ 1075891 (-)
G404784 NA other upstream 1543556 1659655 ~ 1660000 (-)
G404976 NA other upstream 1739540 1855639 ~ 1880988 (-)
G405053 NA other upstream 1901588 2017687 ~ 2018050 (-)

Expression


Co-expression Network