G403840



Basic Information


Item Value
gene id G403840
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 433359 ~ 433589 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU464232
TCGCGAGTCTCTGAAGTCGTCGTGTGTCGGTGGATAGTGTTTGCAGAGGCGCTCCAGGATCTGTTTATAGTGCATGAGGCGGTGCAGCGGCCGCAGGAAGAAGATGTTGAGTGGCAGGTAACAGACCTTCTGAAGCTCAAAGTCTCGGCACAAACCCTCCAGCTTTCGGGAAGAGCGACACGTCCTTTCCAGCTCCAGCAACGCCTCTGAATGCTTCTGAAGATGAGCTGT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU464232 True 231 lncRNA 0.55 1 433359 433589

Neighbor


gene id symbol gene type direction distance location
CI01000299_00185106_00209299 NA coding downstream 224060 184774 ~ 209299 (-)
CI01000299_00169255_00170695 NA coding downstream 262373 169223 ~ 170986 (-)
CI01000299_00448948_00449565 NA coding upstream 15274 448863 ~ 449757 (-)
CI01000299_00452374_00452868 NA coding upstream 17752 451341 ~ 452868 (-)
CI01000299_00670925_00672195 NA coding upstream 237091 670680 ~ 673625 (-)
CI01000299_01003547_01034507 NA coding upstream 569730 1003319 ~ 1034812 (-)
CI01000299_01057889_01063623 NA coding upstream 624231 1057820 ~ 1063623 (-)
G403858 NA non-coding downstream 3394 429635 ~ 429965 (-)
G403857 NA non-coding downstream 3930 428433 ~ 429429 (-)
G403856 NA non-coding downstream 6207 426870 ~ 427152 (-)
G403855 NA non-coding downstream 7756 425311 ~ 425603 (-)
G403854 NA non-coding downstream 8206 424899 ~ 425153 (-)
G403841 NA non-coding upstream 4720 438309 ~ 438786 (-)
G403838 NA non-coding upstream 11200 444789 ~ 446479 (-)
G403866 NA non-coding upstream 33085 466674 ~ 466935 (-)
G403867 NA non-coding upstream 33561 467150 ~ 467350 (-)
G403874 NA non-coding upstream 44381 477970 ~ 478252 (-)
G404372 NA other upstream 637018 1070607 ~ 1075891 (-)
G404784 NA other upstream 1226066 1659655 ~ 1660000 (-)
G404976 NA other upstream 1422050 1855639 ~ 1880988 (-)
G405053 NA other upstream 1584098 2017687 ~ 2018050 (-)

Expression



Co-expression Network