G403838


Basic Information

Item Value
gene id G403838
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 444789 ~ 446479 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU464230
AACATATTCACGCACTGTCAAACATACATTTCTGCCAACATATAATCCATATTGTTTTTTTTGTTTTTTTAATATATATATATATAATATGCATTAAGAAAGAATTAAAATGTTTAAAAAAAGATTAAAAGAATTTTGGCACTCAAGCATTTAGACAAAAGGCAGCTGCTTCCTTCAGAGAAAGACTTTTTTTTCTTGCACCATGACAGAGTAATCACTAACTATGAGGGATTGTGTGGCGTTCCCTCACCGGACACAAAACTAGTGTGGAGTGGTTCACAGTTAGTATCAAAACTTGTATAAAAACATCTACAAAAGAAAGGTTGGAGTGCGGTACAAACGCTTGGAAGGCAGCATGTGCCGTAGAGTCTCAGGCCAGCAGAGATGATGCATCTAAAACATTACAAATCCAACTTGTGCATCGACGGCGGTCTACAGGTGTGAGCCGGGACGTCCGGGTCACTTCACCCAAAAATTAAAAAGTACCATTTTATTTTGCATCAAAACAAATGTATTTTTAGAAGCAATAACATTTTTCATGACATGTTTTTCCTAAATTTCTACTGTAATTCAGCAATGAAAAAGTTTTATTTGAATTAAAATCAGTATAAATCCATCAAATAATACCATTATGTAATCTAACTATTGTACTATATGTGTGTGTGTGTGTGTGTATATATATATAAATAATAATGCAAATTTCAGGGCAAATTGTCATGAAAAATGCAATAAAAAAAATACAAAATAAAATGGTCCTAAAATAGGCTTTATTTTCTTCATGCAAACAAAAAACTTAATTTTTTCCCTTTCGATTTTGGGGTGAAATATGACCTGAACATCTTTCACCAGTTTTTTTAGACAGAAGGTGACAATTCTTCATAAACATCAGTAATTAAAGCTGTGGTGTTACTACAGTTAAAAACTGTCCCGAGATTGAATTTCTCGTCTTACTTTTACAGGCATTTAGTTCATTAAACACAAGCAGAACAATTTCATGTGTAAACTGTTCGTAAATAGTTTGCATTCAACTCAATGACACCGGTTTCACTTACACAATAGCACCCAATAAACCATTTATAAAAGCTCTCGCACATAAACAGTCACGTACAAATCAATAAAACATTCGCAAAAACATTCTTAAGAATAAATCATCGCATATAACCATTCAATAAAACCATTCCTGAAAGCATTCTTGCCAATTTTACGGACAATTTACACAAATGAGTTGCATTTCATGAACATGGACTGTTGTTTACTTACTATGATATCGTGTCTTACTGCACATTTAAAACAAACAGCAAAACTGGAAGTGTTTGACTGTTACCTGCTGATCTATCCATCGTGCGATGTTGTGATGATACTGTAGTAGTTCTTTGGACTCTGACCTTGATATTCTCAAAAAACTTCACATGTGAACCCATTCAAAATCTGATTGTTTTCTATAAAGTAAAATGACGATATAGCACATGAAACAATTCCTGCTCAAACCCGCTGCCGTAAGAAATATGTTAAAGTGTGTTAGGAGAACCTGATTGAGAACCTGACGTAAACGGCCAGTGTGTGTGTGTGTGTGTGTGTGTGTTGGTGTTTCGGCAGGCGGTCCGAAGGTCTCTTTGGTCAGTAGGCGTGCGGCTCTTTGCGGCTCAAGGAGCGGATGTGACTGGAAGAGCAAGTGGCACTGCGGATCACCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU464230 True 1691 lncRNA 0.36 1 444789 446479

Neighbor

gene id symbol gene type direction distance location
CI01000299_00185106_00209299 NA coding downstream 235490 184774 ~ 209299 (-)
CI01000299_00169255_00170695 NA coding downstream 273803 169223 ~ 170986 (-)
CI01000299_00448948_00449565 NA coding upstream 2384 448863 ~ 449757 (-)
CI01000299_00452374_00452868 NA coding upstream 4862 451341 ~ 452868 (-)
CI01000299_00670925_00672195 NA coding upstream 224201 670680 ~ 673625 (-)
CI01000299_01003547_01034507 NA coding upstream 556840 1003319 ~ 1034812 (-)
CI01000299_01057889_01063623 NA coding upstream 611341 1057820 ~ 1063623 (-)
G403841 NA non-coding downstream 6003 438309 ~ 438786 (-)
G403840 NA non-coding downstream 11200 433359 ~ 433589 (-)
G403858 NA non-coding downstream 14824 429635 ~ 429965 (-)
G403857 NA non-coding downstream 15360 428433 ~ 429429 (-)
G403856 NA non-coding downstream 17637 426870 ~ 427152 (-)
G403866 NA non-coding upstream 20195 466674 ~ 466935 (-)
G403867 NA non-coding upstream 20671 467150 ~ 467350 (-)
G403874 NA non-coding upstream 31491 477970 ~ 478252 (-)
G403875 NA non-coding upstream 32065 478544 ~ 479150 (-)
G403913 NA non-coding upstream 79042 525521 ~ 525854 (-)
G404372 NA other upstream 624128 1070607 ~ 1075891 (-)
G404784 NA other upstream 1213176 1659655 ~ 1660000 (-)
G404976 NA other upstream 1409160 1855639 ~ 1880988 (-)
G405053 NA other upstream 1571208 2017687 ~ 2018050 (-)

Expression


Co-expression Network