G404161



Basic Information


Item Value
gene id G404161
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 555444 ~ 555651 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU464571
GCCAAGTATCCTTAATCTCCAAGCTAACAGCCTATTCTTCTAAGATGCCACCATTGGCTCGGCATTCATATTCAACACCACTGGAAGCTGTGGGAACTGAATTTCCCCGTTCGCCTGCGTCTTTTCAAAGCGCTCATTAGCATGAGTGAGCAGCAAGCAAATTGCCAAGTCACTGTTCTGAATGCAGATTGTTGAAGGTAAGCTAGTG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU464571 True 208 lncRNA 0.46 1 555444 555651

Neighbor


gene id symbol gene type direction distance location
CI01000299_00452374_00452868 NA coding downstream 102576 451341 ~ 452868 (-)
CI01000299_00448948_00449565 NA coding downstream 105687 448863 ~ 449757 (-)
CI01000299_00185106_00209299 NA coding downstream 346145 184774 ~ 209299 (-)
CI01000299_00169255_00170695 NA coding downstream 384458 169223 ~ 170986 (-)
CI01000299_00670925_00672195 NA coding upstream 115029 670680 ~ 673625 (-)
CI01000299_01003547_01034507 NA coding upstream 447668 1003319 ~ 1034812 (-)
CI01000299_01057889_01063623 NA coding upstream 502169 1057820 ~ 1063623 (-)
CI01000299_01114487_01122666 NA coding upstream 558099 1113750 ~ 1124230 (-)
CI01000299_01222994_01268707 NA coding upstream 667208 1222859 ~ 1270326 (-)
G403913 NA non-coding downstream 29590 525521 ~ 525854 (-)
G403875 NA non-coding downstream 76294 478544 ~ 479150 (-)
G403874 NA non-coding downstream 77192 477970 ~ 478252 (-)
G403867 NA non-coding downstream 88094 467150 ~ 467350 (-)
G403866 NA non-coding downstream 88509 466674 ~ 466935 (-)
G404162 NA non-coding upstream 202 555853 ~ 556063 (-)
G404166 NA non-coding upstream 30495 586146 ~ 586347 (-)
G404168 NA non-coding upstream 40917 596568 ~ 601001 (-)
G404169 NA non-coding upstream 49422 605073 ~ 605582 (-)
G404372 NA other upstream 514956 1070607 ~ 1075891 (-)
G404784 NA other upstream 1104004 1659655 ~ 1660000 (-)
G404976 NA other upstream 1299988 1855639 ~ 1880988 (-)
G405053 NA other upstream 1462036 2017687 ~ 2018050 (-)

Expression



Co-expression Network