G403965


Basic Information

Item Value
gene id G403965
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 582756 ~ 583123 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU464363
CAATTCTGTATAAATTTAGAAACTTTTTTGTTTGTTTCAAACTGAGATCACAATTCTGAATGACAACTAAAACAAAAAAAACAAAACATGTAATTTACTAGAGGTTCTGACAAAATATTAATTGCTGCAGTCTATTTTAACATTTTAAATATATTTGAATTAATTATTTAAAAAAAAAAAAAATCTGTTTGGATGTATGATTCAATGACACGCCCATAAATACTCTTGTTTCATTACTGGATGAATCAGTGTATTTGAAAGAATCTGTTGAAAGAAGATTCAACGTCAAATACATTTTTAACAGTCACTTGTCGCCACCTGGTGGTAAAACAATGTAATCGATAAATGCGTTTTTCGTTTTCAGCGCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU464363 True 368 lncRNA 0.28 1 582756 583123

Neighbor

gene id symbol gene type direction distance location
CI01000299_00419297_00444862 NA coding upstream 136868 419297 ~ 445888 (+)
CI01000299_00345042_00361660 KPNB3, IPO5.L, IPO5.S, IPO5 coding upstream 220670 345042 ~ 362086 (+)
CI01000299_00315123_00328550 RAP2B, RAP2C, RAP2A, RAP2AB, RAP2A.S coding upstream 252593 315123 ~ 330163 (+)
CI01000299_00255175_00294177 MBNL2 coding upstream 288579 255175 ~ 294177 (+)
CI01000299_00151569_00153623 SLC5A3A coding upstream 428284 151519 ~ 154472 (+)
CI01000299_00689032_00727635 NA coding downstream 105783 688906 ~ 727836 (+)
CI01000299_00795673_00796901 GPC6 coding downstream 212550 795673 ~ 797157 (+)
CI01000299_00826470_00828773 NA coding downstream 243310 826433 ~ 828960 (+)
CI01000299_00862803_00911972 GPC6A, GPC6 coding downstream 279680 862803 ~ 911972 (+)
CI01000299_01036243_01046776 NA coding downstream 451914 1035037 ~ 1047603 (+)
G403952 NA non-coding upstream 32014 550501 ~ 550742 (+)
G403595 NA non-coding upstream 419961 60419 ~ 162795 (+)
G403971 NA non-coding downstream 19709 602832 ~ 603583 (+)
G404016 NA non-coding downstream 66292 649415 ~ 649814 (+)
G404137 NA non-coding downstream 487485 1070608 ~ 1075893 (+)
G404074 NA non-coding downstream 540456 1123579 ~ 1125274 (+)
G404075 NA non-coding downstream 542617 1125740 ~ 1127444 (+)
G403609 NA other upstream 171968 364139 ~ 410788 (+)
G403578 NA other upstream 510485 35462 ~ 72271 (+)
G403972 NA other downstream 21747 604870 ~ 606350 (+)
G405609 NA other downstream 2571474 3154597 ~ 3155174 (+)
CI01000299_04131136_04133439 PCNP other downstream 3548135 4131060 ~ 4133941 (+)
G405842 NA other downstream 3712410 4295533 ~ 4320141 (+)
CI01000299_04480751_04492829 NA other downstream 3906695 4480553 ~ 4493116 (+)

Expression


Co-expression Network