Gene
RNA
| Item | Value |
|---|---|
| gene id | G403971 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000299 |
| NCBI id | null |
| chromosome length | 6567443 |
| location | 602832 ~ 603583 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU464369 | True | 752 | lncRNA | 0.38 | 1 | 602832 | 603583 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000299_00419297_00444862 | NA | coding | upstream | 156944 | 419297 ~ 445888 (+) |
| CI01000299_00345042_00361660 | KPNB3, IPO5.L, IPO5.S, IPO5 | coding | upstream | 240746 | 345042 ~ 362086 (+) |
| CI01000299_00315123_00328550 | RAP2B, RAP2C, RAP2A, RAP2AB, RAP2A.S | coding | upstream | 272669 | 315123 ~ 330163 (+) |
| CI01000299_00255175_00294177 | MBNL2 | coding | upstream | 308655 | 255175 ~ 294177 (+) |
| CI01000299_00151569_00153623 | SLC5A3A | coding | upstream | 448360 | 151519 ~ 154472 (+) |
| CI01000299_00689032_00727635 | NA | coding | downstream | 85323 | 688906 ~ 727836 (+) |
| CI01000299_00795673_00796901 | GPC6 | coding | downstream | 192090 | 795673 ~ 797157 (+) |
| CI01000299_00826470_00828773 | NA | coding | downstream | 222850 | 826433 ~ 828960 (+) |
| CI01000299_00862803_00911972 | GPC6A, GPC6 | coding | downstream | 259220 | 862803 ~ 911972 (+) |
| CI01000299_01036243_01046776 | NA | coding | downstream | 431454 | 1035037 ~ 1047603 (+) |
| G403965 | NA | non-coding | upstream | 19709 | 582756 ~ 583123 (+) |
| G403952 | NA | non-coding | upstream | 52090 | 550501 ~ 550742 (+) |
| G403595 | NA | non-coding | upstream | 440037 | 60419 ~ 162795 (+) |
| G404016 | NA | non-coding | downstream | 45832 | 649415 ~ 649814 (+) |
| G404137 | NA | non-coding | downstream | 467025 | 1070608 ~ 1075893 (+) |
| G404074 | NA | non-coding | downstream | 519996 | 1123579 ~ 1125274 (+) |
| G404075 | NA | non-coding | downstream | 522157 | 1125740 ~ 1127444 (+) |
| G404385 | NA | non-coding | downstream | 537773 | 1141356 ~ 1141636 (+) |
| G403609 | NA | other | upstream | 192044 | 364139 ~ 410788 (+) |
| G403578 | NA | other | upstream | 530561 | 35462 ~ 72271 (+) |
| G403972 | NA | other | downstream | 1287 | 604870 ~ 606350 (+) |
| G405609 | NA | other | downstream | 2551014 | 3154597 ~ 3155174 (+) |
| CI01000299_04131136_04133439 | PCNP | other | downstream | 3527675 | 4131060 ~ 4133941 (+) |
| G405842 | NA | other | downstream | 3691950 | 4295533 ~ 4320141 (+) |
| CI01000299_04480751_04492829 | NA | other | downstream | 3886235 | 4480553 ~ 4493116 (+) |
