Gene
RNA
| Item | Value |
|---|---|
| gene id | G404137 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000299 |
| NCBI id | null |
| chromosome length | 6567443 |
| location | 1070608 ~ 1075893 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU464546 | False | 584 | lncRNA | 0.45 | 2 | 1070608 | 1075893 |
| TU464547 | True | 460 | lncRNA | 0.44 | 2 | 1070608 | 1075769 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000299_01049508_01055558 | NA | coding | upstream | 14872 | 1049390 ~ 1055736 (+) |
| CI01000299_01036243_01046776 | NA | coding | upstream | 23005 | 1035037 ~ 1047603 (+) |
| CI01000299_00862803_00911972 | GPC6A, GPC6 | coding | upstream | 158636 | 862803 ~ 911972 (+) |
| CI01000299_00826470_00828773 | NA | coding | upstream | 241648 | 826433 ~ 828960 (+) |
| CI01000299_00795673_00796901 | GPC6 | coding | upstream | 273451 | 795673 ~ 797157 (+) |
| CI01000299_01139684_01147241 | NA | coding | downstream | 63604 | 1139497 ~ 1147248 (+) |
| CI01000299_01197545_01215711 | NA | coding | downstream | 121529 | 1197422 ~ 1215989 (+) |
| CI01000299_01855614_01858092 | SLITRK6 | coding | downstream | 779721 | 1855614 ~ 1858703 (+) |
| CI01000299_02118245_02120332 | SLITRK1 | coding | downstream | 1040968 | 2116861 ~ 2121858 (+) |
| CI01000299_02195854_02198465 | NA | coding | downstream | 1119905 | 2195798 ~ 2198925 (+) |
| G404016 | NA | non-coding | upstream | 420794 | 649415 ~ 649814 (+) |
| G403971 | NA | non-coding | upstream | 467025 | 602832 ~ 603583 (+) |
| G403965 | NA | non-coding | upstream | 487485 | 582756 ~ 583123 (+) |
| G403952 | NA | non-coding | upstream | 519866 | 550501 ~ 550742 (+) |
| G403595 | NA | non-coding | upstream | 907813 | 60419 ~ 162795 (+) |
| G404074 | NA | non-coding | downstream | 47686 | 1123579 ~ 1125274 (+) |
| G404075 | NA | non-coding | downstream | 49847 | 1125740 ~ 1127444 (+) |
| G404385 | NA | non-coding | downstream | 65463 | 1141356 ~ 1141636 (+) |
| G404424 | NA | non-coding | downstream | 119584 | 1195477 ~ 1195736 (+) |
| G403972 | NA | other | upstream | 464258 | 604870 ~ 606350 (+) |
| G403609 | NA | other | upstream | 659820 | 364139 ~ 410788 (+) |
| G403578 | NA | other | upstream | 998337 | 35462 ~ 72271 (+) |
| G405609 | NA | other | downstream | 2078704 | 3154597 ~ 3155174 (+) |
| CI01000299_04131136_04133439 | PCNP | other | downstream | 3055365 | 4131060 ~ 4133941 (+) |
| G405842 | NA | other | downstream | 3219640 | 4295533 ~ 4320141 (+) |
| CI01000299_04480751_04492829 | NA | other | downstream | 3413925 | 4480553 ~ 4493116 (+) |
| CI01000299_04703290_04704365 | NA | other | downstream | 3626489 | 4703071 ~ 4704780 (+) |
