G404075


Basic Information

Item Value
gene id G404075
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 1125740 ~ 1127444 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU464484
CCAACCACGTCCATCTCATATTTCACATCAACAAAGTCCAATGGATGAAAGTCTCCAAAGAACTTGCGGGGAGCTACTCCCATCTTTGAGGTTTCAGTGAAATCCACCATCTTCACTCACTTGCCGTTTACTGCCACTGCTCTGGACAAATCTGCGAAACTGGTGCGTAAACTTAAAAGTAGACCGCGATCGAATGTAACGCACGCGGCGCGAGTCCAAAGCAAAGTGAAACTTCTCCTTAAACGACTTTCTTAATCATAGTAAAATTGCAAAAGTGGCGCGAACGCGACCTGCCGTGAACCATGTGGGTGAATGAAGGGCGGCTCCCGTTGAACGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU464484 True 339 lncRNA 0.47 2 1125740 1127444

Neighbor

gene id symbol gene type direction distance location
CI01000299_01049508_01055558 NA coding upstream 70004 1049390 ~ 1055736 (+)
CI01000299_01036243_01046776 NA coding upstream 78137 1035037 ~ 1047603 (+)
CI01000299_00862803_00911972 GPC6A, GPC6 coding upstream 213768 862803 ~ 911972 (+)
CI01000299_00826470_00828773 NA coding upstream 296780 826433 ~ 828960 (+)
CI01000299_00795673_00796901 GPC6 coding upstream 328583 795673 ~ 797157 (+)
CI01000299_01139684_01147241 NA coding downstream 12053 1139497 ~ 1147248 (+)
CI01000299_01197545_01215711 NA coding downstream 69978 1197422 ~ 1215989 (+)
CI01000299_01855614_01858092 SLITRK6 coding downstream 728170 1855614 ~ 1858703 (+)
CI01000299_02118245_02120332 SLITRK1 coding downstream 989417 2116861 ~ 2121858 (+)
CI01000299_02195854_02198465 NA coding downstream 1068354 2195798 ~ 2198925 (+)
G404074 NA non-coding upstream 466 1123579 ~ 1125274 (+)
G404137 NA non-coding upstream 49847 1070608 ~ 1075893 (+)
G404016 NA non-coding upstream 475926 649415 ~ 649814 (+)
G403971 NA non-coding upstream 522157 602832 ~ 603583 (+)
G403965 NA non-coding upstream 542617 582756 ~ 583123 (+)
G404385 NA non-coding downstream 13912 1141356 ~ 1141636 (+)
G404424 NA non-coding downstream 68033 1195477 ~ 1195736 (+)
G404436 NA non-coding downstream 84211 1211655 ~ 1211871 (+)
G404544 NA non-coding downstream 188832 1316276 ~ 1316603 (+)
G403972 NA other upstream 519390 604870 ~ 606350 (+)
G403609 NA other upstream 714952 364139 ~ 410788 (+)
G403578 NA other upstream 1053469 35462 ~ 72271 (+)
G405609 NA other downstream 2027153 3154597 ~ 3155174 (+)
CI01000299_04131136_04133439 PCNP other downstream 3003814 4131060 ~ 4133941 (+)
G405842 NA other downstream 3168089 4295533 ~ 4320141 (+)
CI01000299_04480751_04492829 NA other downstream 3362374 4480553 ~ 4493116 (+)
CI01000299_04703290_04704365 NA other downstream 3574938 4703071 ~ 4704780 (+)

Expression


Co-expression Network