G405366


Basic Information

Item Value
gene id G405366
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 2655180 ~ 2655413 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU465854
GAACATGAAAACGTTTCCTGGCTTTCTGGCACAAAGTCAGTATAAGAGAACGACTACACAAAAAGCCGCCAGTGACTGATCTATGGTCAGTATTTACTTTCACACTACTCACACAGTCTTTTTTGTCCCTCTATAAAGTCACATGCTGAGTTGTGGTGAAGTGTGAGTCAATAAATGGGGTAAACGGAACGGTTTTCATGTGTGTTTGTGAAATATCACACCCGATAAAAAAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU465854 True 234 lncRNA 0.41 1 2655180 2655413

Neighbor

gene id symbol gene type direction distance location
CI01000299_02612562_02613926 NA coding upstream 40388 2612499 ~ 2614792 (+)
CI01000299_02195854_02198465 NA coding upstream 456255 2195798 ~ 2198925 (+)
CI01000299_02118245_02120332 SLITRK1 coding upstream 533322 2116861 ~ 2121858 (+)
CI01000299_01855614_01858092 SLITRK6 coding upstream 796477 1855614 ~ 1858703 (+)
CI01000299_01197545_01215711 NA coding upstream 1439191 1197422 ~ 1215989 (+)
CI01000299_02696797_02704180 TUBA1C, TUBA1B, TUBA1A, TUBA8L2, TUBA4B.S, TUBA4A, TUBA4B coding downstream 41219 2696632 ~ 2704220 (+)
CI01000299_02706136_02711943 STK16 coding downstream 50460 2705873 ~ 2713740 (+)
CI01000299_02753238_02760499 PUR9, ATIC coding downstream 97825 2753238 ~ 2760953 (+)
CI01000299_02813216_02818668 CPO coding downstream 157728 2813141 ~ 2819096 (+)
CI01000299_03144958_03149338 NA coding downstream 488977 3144390 ~ 3149340 (+)
G405365 NA non-coding upstream 1564 2653406 ~ 2653616 (+)
G405364 NA non-coding upstream 2027 2652908 ~ 2653153 (+)
G405362 NA non-coding upstream 10327 2644549 ~ 2644853 (+)
G405361 NA non-coding upstream 10721 2644092 ~ 2644459 (+)
G405352 NA non-coding upstream 21447 2633389 ~ 2633733 (+)
G405329 NA non-coding downstream 3941 2659354 ~ 2715141 (+)
G405385 NA non-coding downstream 65449 2720862 ~ 2721324 (+)
G405390 NA non-coding downstream 74860 2730273 ~ 2730509 (+)
G405407 NA non-coding downstream 155039 2810452 ~ 2810672 (+)
G405611 NA non-coding downstream 553513 3208926 ~ 3209411 (+)
G403972 NA other upstream 2048830 604870 ~ 606350 (+)
G403609 NA other upstream 2244392 364139 ~ 410788 (+)
G403578 NA other upstream 2582909 35462 ~ 72271 (+)
G405609 NA other downstream 499184 3154597 ~ 3155174 (+)
CI01000299_04131136_04133439 PCNP other downstream 1475845 4131060 ~ 4133941 (+)
G405842 NA other downstream 1640120 4295533 ~ 4320141 (+)
CI01000299_04480751_04492829 NA other downstream 1834405 4480553 ~ 4493116 (+)
CI01000299_04703290_04704365 NA other downstream 2046969 4703071 ~ 4704780 (+)

Expression


Co-expression Network