Gene
RNA
| Item | Value |
|---|---|
| gene id | G405329 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000299 |
| NCBI id | null |
| chromosome length | 6567443 |
| location | 2659354 ~ 2715141 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU465801 | True | 406 | lncRNA | 0.21 | 2 | 2659354 | 2715141 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000299_02612562_02613926 | NA | coding | upstream | 44562 | 2612499 ~ 2614792 (+) |
| CI01000299_02195854_02198465 | NA | coding | upstream | 460429 | 2195798 ~ 2198925 (+) |
| CI01000299_02118245_02120332 | SLITRK1 | coding | upstream | 537496 | 2116861 ~ 2121858 (+) |
| CI01000299_01855614_01858092 | SLITRK6 | coding | upstream | 800651 | 1855614 ~ 1858703 (+) |
| CI01000299_01197545_01215711 | NA | coding | upstream | 1443365 | 1197422 ~ 1215989 (+) |
| CI01000299_02753238_02760499 | PUR9, ATIC | coding | downstream | 38097 | 2753238 ~ 2760953 (+) |
| CI01000299_02813216_02818668 | CPO | coding | downstream | 98000 | 2813141 ~ 2819096 (+) |
| CI01000299_03144958_03149338 | NA | coding | downstream | 429249 | 3144390 ~ 3149340 (+) |
| CI01000299_03157191_03166687 | ABCB6, ABCB6A | coding | downstream | 442050 | 3157191 ~ 3166701 (+) |
| CI01000299_03170577_03174986 | CNPPD1 | coding | downstream | 455436 | 3170577 ~ 3175003 (+) |
| G405366 | NA | non-coding | upstream | 3941 | 2655180 ~ 2655413 (+) |
| G405365 | NA | non-coding | upstream | 5738 | 2653406 ~ 2653616 (+) |
| G405364 | NA | non-coding | upstream | 6201 | 2652908 ~ 2653153 (+) |
| G405362 | NA | non-coding | upstream | 14501 | 2644549 ~ 2644853 (+) |
| G405361 | NA | non-coding | upstream | 14895 | 2644092 ~ 2644459 (+) |
| G405385 | NA | non-coding | downstream | 5721 | 2720862 ~ 2721324 (+) |
| G405390 | NA | non-coding | downstream | 15132 | 2730273 ~ 2730509 (+) |
| G405407 | NA | non-coding | downstream | 95311 | 2810452 ~ 2810672 (+) |
| G405611 | NA | non-coding | downstream | 493785 | 3208926 ~ 3209411 (+) |
| G405618 | NA | non-coding | downstream | 605383 | 3320524 ~ 3321012 (+) |
| G403972 | NA | other | upstream | 2053004 | 604870 ~ 606350 (+) |
| G403609 | NA | other | upstream | 2248566 | 364139 ~ 410788 (+) |
| G403578 | NA | other | upstream | 2587083 | 35462 ~ 72271 (+) |
| G405609 | NA | other | downstream | 439456 | 3154597 ~ 3155174 (+) |
| CI01000299_04131136_04133439 | PCNP | other | downstream | 1416117 | 4131060 ~ 4133941 (+) |
| G405842 | NA | other | downstream | 1580392 | 4295533 ~ 4320141 (+) |
| CI01000299_04480751_04492829 | NA | other | downstream | 1774677 | 4480553 ~ 4493116 (+) |
| CI01000299_04703290_04704365 | NA | other | downstream | 1987241 | 4703071 ~ 4704780 (+) |
