G406868


Basic Information

Item Value
gene id G406868
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 3120997 ~ 3121253 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU467504
GGTTGTTACACACCCTGTGGACACACATCTGTCAAGTCAATTCAAGTCACCTTTATTTATATAGCGCTTTTTACAATGTAGATTGTGTCAAAGCAGCTTTACATTGATAACTGGTACATTATTTGGCTGCACAGCAGCTCTTAAAAGAATAGTGTCAATGCAGGCAAATCAAAGCACTGTTGAATATCAAATGTCAATAAGGTGTTTGATCTGTGTTCAAACACCTTATAAAAGTGAATTTTGCATAATAGGTCCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU467504 True 257 lncRNA 0.37 1 3120997 3121253

Neighbor

gene id symbol gene type direction distance location
CI01000299_03104921_03106385 NA coding downstream 14612 3104605 ~ 3106385 (-)
CI01000299_02951402_03057288 PARD3BA coding downstream 63709 2951402 ~ 3057288 (-)
CI01000299_02891830_02905146 NRP2B, NRP2A, NRP2 coding downstream 215851 2891574 ~ 2905146 (-)
CI01000299_02850281_02876863 NRP2A, NRP2 coding downstream 244134 2850281 ~ 2876863 (-)
CI01000299_02833341_02845817 NA coding downstream 275127 2833090 ~ 2845870 (-)
CI01000299_03206204_03214303 MDH1B coding upstream 84932 3206185 ~ 3214303 (-)
CI01000299_03341031_03366645 KLF7, KLF7A, KLF7B coding upstream 219513 3340766 ~ 3366728 (-)
CI01000299_03492360_03492614 NA coding upstream 370961 3492214 ~ 3493144 (-)
CI01000299_04136702_04142005 NA coding upstream 1013567 4134820 ~ 4142125 (-)
CI01000299_04158468_04164223 MX2, MX1, MXB, MX, MXA coding upstream 1036748 4158001 ~ 4164715 (-)
G406842 NA non-coding downstream 62991 3057706 ~ 3058006 (-)
G406790 NA non-coding downstream 191448 2929340 ~ 2929549 (-)
G406786 NA non-coding downstream 198612 2921310 ~ 2922385 (-)
G406779 NA non-coding downstream 291542 2829217 ~ 2829455 (-)
G406772 NA non-coding downstream 400449 2720213 ~ 2720548 (-)
G406884 NA non-coding upstream 33347 3154600 ~ 3155118 (-)
G406858 NA non-coding upstream 37143 3158396 ~ 3204366 (-)
G406889 NA non-coding upstream 45278 3166531 ~ 3169255 (-)
G406872 NA non-coding upstream 53120 3174373 ~ 3175921 (-)
G406862 NA non-coding upstream 75040 3196293 ~ 3196999 (-)
G405053 NA other downstream 1102947 2017687 ~ 2018050 (-)
G404976 NA other downstream 1240009 1855639 ~ 1880988 (-)
G404784 NA other downstream 1460997 1659655 ~ 1660000 (-)
G404372 NA other downstream 2045106 1070607 ~ 1075891 (-)
CI01000299_00670925_00672195 NA other downstream 2448141 670680 ~ 673625 (-)
G407413 NA other upstream 1354741 4475994 ~ 4550721 (-)
CI01000299_04913779_04927715 NA other upstream 1804715 4913373 ~ 4927715 (-)
CI01000299_05428160_05443433 APP, APPA other upstream 2320084 5427661 ~ 5443433 (-)

Expression


Co-expression Network