G406942


Basic Information

Item Value
gene id G406942
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 3303752 ~ 3305190 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU467588
TCCAGTTTGCGATAGAAATTCCGAAGTTTGGCTTCAAAGTCCCGCTTGTACGGCGCAGGGGCCCGAGCGTTGGCTCGTTGTGTACCTGAGAGCAAGAGATCAGAGTTACGAGAGAGTTTGGTGAAAAAAGTGAGCCTGACAAGAACCAAAATCAGCTCATCAAACATACGTAAGTGTGCAGAAAATGTATAGATTATGGTGAAAAAAACAGGCTTTGTTTGTCAAATCTGATGGCTCTTCACAAATAAGATTTCTTTTATATATCAATCATTTCTCCTAGAGTCAGAAAATCTAAACGTAAAATAAACGTAACTGAGATCTCCATTATATCTTCTGAGATAAAAAACCCCATCTCTGAGCAATAAAAATGTTCAATCTCAATGAATGAATGAATAGTAGTAGTAGTACATATGGGATAGGGTGCAAAATTACTGTTTTCCTAGACAATTTAAATTAAAGATAAAATAAATTAAACATAACTGAGATCTCCATTATATCTCTATAGATATATTAATGAACAATGGATGGATAGATGGATGATACAATAGATAGATGGATAGATGGATGGATGATAGAGGATGGATAGATGGATGGTACAGTGGAAGGATGGATGGACAGATTATATCTCTTTAGATATTAATGAACAAAGGATAGATAGATAGATAGATAGATAGATAGATTTTAAAGGTTAAAAGGAATCAGAATGGTTTCCAATCGAGAATATAAAGCACTGTAGAATCAGCAGAAGCTGTATCCAGCGGAGAGTGTAATCCCTGAGTGTCAGCGGTGACTAAAGTCAGATCACAGTGAGTTAGAGCATGATTCCCTCTGGCAGCGTGATGTCCGCCACACTCCAAACAGACTTGTGAAAATCAGAGTGTCAGGATGACGGTTAAAGAGCAGCCTGCAGGGATTAGACAAAAACCCTGAACTCCAACCACACAACAAATCCCAAATAGCGGATTTGATGGCTTTGGCAGCCAACTCAAAAAATACCCAGGAAATCTGGTGGACTGAAGTCAAGCTCTACAACCAAACCAAAGCAATGCTGTGGAAGGATGGGTATGACCAGAAACACCATCTCTTAAATGTATCAAATTTAAGATATGAAATCATTTTTGAAATATTTAAATAGTATTAATATTAAAAGTTTTTTAGATGAGACCGTGAGGAACCGACCAGGGGAGTTCTGAGGGGAGGAGACCGGAGACCCTCGTGGTGATTGACAGTAGCTGGGGTGCAGTAAGGCATGAGGTGGCACATACGACATCACTTCCTCTTCAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU467588 True 1285 lncRNA 0.39 3 3303752 3305190

Neighbor

gene id symbol gene type direction distance location
CI01000299_03206204_03214303 MDH1B coding downstream 89449 3206185 ~ 3214303 (-)
CI01000299_03104921_03106385 NA coding downstream 197367 3104605 ~ 3106385 (-)
CI01000299_02951402_03057288 PARD3BA coding downstream 246464 2951402 ~ 3057288 (-)
CI01000299_02891830_02905146 NRP2B, NRP2A, NRP2 coding downstream 398606 2891574 ~ 2905146 (-)
CI01000299_02850281_02876863 NRP2A, NRP2 coding downstream 426889 2850281 ~ 2876863 (-)
CI01000299_03341031_03366645 KLF7, KLF7A, KLF7B coding upstream 35576 3340766 ~ 3366728 (-)
CI01000299_03492360_03492614 NA coding upstream 187024 3492214 ~ 3493144 (-)
CI01000299_04136702_04142005 NA coding upstream 829630 4134820 ~ 4142125 (-)
CI01000299_04158468_04164223 MX2, MX1, MXB, MX, MXA coding upstream 852811 4158001 ~ 4164715 (-)
CI01000299_04171373_04175441 NA coding upstream 865959 4171149 ~ 4175441 (-)
G406932 NA non-coding downstream 8615 3289462 ~ 3295137 (-)
G406912 NA non-coding downstream 63904 3239309 ~ 3239848 (-)
G406858 NA non-coding downstream 99386 3158396 ~ 3204366 (-)
G406941 NA non-coding upstream 7193 3312383 ~ 3316446 (-)
G406927 NA non-coding upstream 28853 3334043 ~ 3335207 (-)
G406928 NA non-coding upstream 68730 3373920 ~ 3401249 (-)
G406971 NA non-coding upstream 109813 3415003 ~ 3415287 (-)
G406972 NA non-coding upstream 112894 3418084 ~ 3418322 (-)
G405053 NA other downstream 1285702 2017687 ~ 2018050 (-)
G404976 NA other downstream 1422764 1855639 ~ 1880988 (-)
G404784 NA other downstream 1643752 1659655 ~ 1660000 (-)
G404372 NA other downstream 2227861 1070607 ~ 1075891 (-)
CI01000299_00670925_00672195 NA other downstream 2630896 670680 ~ 673625 (-)
G407413 NA other upstream 1170804 4475994 ~ 4550721 (-)
CI01000299_04913779_04927715 NA other upstream 1620778 4913373 ~ 4927715 (-)
CI01000299_05428160_05443433 APP, APPA other upstream 2136147 5427661 ~ 5443433 (-)

Expression


Co-expression Network