G405660


Basic Information

Item Value
gene id G405660
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 3406585 ~ 3406810 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU466154
GTCTCTGGTGTCCCCAGAATGTGTCTGTGAAGTTCCAGCTCAAAATACCCCACAGATCATTTATTATAGCTTGTCAAATTTGCCCCTATTTGGGTGTGAGCAAAAACACACTGTTTGTGTGTGTCCCTTTAAATGCAAATGAGCAGCTGCTCCCGGCCCCCTTTCCAGAAGAGGGCGGAGCTTTAACAGTTTGCGCTTCGGTTGCTCAACACCAACAAAACTGGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU466154 True 226 lncRNA 0.47 1 3406585 3406810

Neighbor

gene id symbol gene type direction distance location
CI01000299_03366963_03373293 NA coding upstream 32903 3366818 ~ 3373682 (+)
CI01000299_03268500_03312490 HECW2 coding upstream 93257 3268193 ~ 3313328 (+)
CI01000299_03267154_03267336 NA coding upstream 139194 3267154 ~ 3267391 (+)
CI01000299_03237334_03244737 GTF3C3 coding upstream 161770 3237334 ~ 3244815 (+)
CI01000299_03215678_03230586 NA coding upstream 175999 3215678 ~ 3230586 (+)
CI01000299_03453437_03453736 NA coding downstream 45490 3452300 ~ 3454209 (+)
CI01000299_03478949_03486009 NA coding downstream 69278 3476088 ~ 3486009 (+)
CI01000299_03495286_03498691 NA coding downstream 87729 3494539 ~ 3498729 (+)
CI01000299_03594891_03678552 ERBB4 coding downstream 188081 3594891 ~ 3679612 (+)
CI01000299_03981006_04059237 ERBB4 coding downstream 574196 3981006 ~ 4059237 (+)
G405621 NA non-coding upstream 71380 3334227 ~ 3335205 (+)
G405619 NA non-coding upstream 85152 3321195 ~ 3321433 (+)
G405618 NA non-coding upstream 85573 3320524 ~ 3321012 (+)
G405611 NA non-coding upstream 197174 3208926 ~ 3209411 (+)
G405407 NA non-coding upstream 595913 2810452 ~ 2810672 (+)
G405663 NA non-coding downstream 3724 3410534 ~ 3410764 (+)
G405690 NA non-coding downstream 55568 3462378 ~ 3462582 (+)
G405693 NA non-coding downstream 60708 3467518 ~ 3467780 (+)
G405695 NA non-coding downstream 62187 3468997 ~ 3469199 (+)
G405697 NA non-coding downstream 65565 3472375 ~ 3472615 (+)
G405609 NA other upstream 251411 3154597 ~ 3155174 (+)
G403972 NA other upstream 2800235 604870 ~ 606350 (+)
G403609 NA other upstream 2995797 364139 ~ 410788 (+)
G403578 NA other upstream 3334314 35462 ~ 72271 (+)
CI01000299_04131136_04133439 PCNP other downstream 724448 4131060 ~ 4133941 (+)
G405842 NA other downstream 888723 4295533 ~ 4320141 (+)
CI01000299_04480751_04492829 NA other downstream 1083008 4480553 ~ 4493116 (+)
CI01000299_04703290_04704365 NA other downstream 1295572 4703071 ~ 4704780 (+)
G406096 NA other downstream 1517652 4924462 ~ 4927844 (+)

Expression


Co-expression Network