G406971


Basic Information

Item Value
gene id G406971
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 3415003 ~ 3415287 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU467617
CGCCTTAGCAAACCAGCCTAGCAACTGTATAACACACTAAATGAACATCTTAGCAACTGTATAACAATGCCCTAGCAACCACCCACACATCCTAGCTTCATGGAGGCGACTTTTGCATGAGCAGGCACCGTACACATTTTCATCAGTAAATGTAAAACTGTTCTCTCAAATCGGACCATCACTAAACAGGCTTTGGAACATTAATTCTTTGTGTTTTTACTCTAATTCAGTCATATTTCAGTCTCTCTGTCTCTCCTCCCTCCATCCCCCGTCACTGTCTGTCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU467617 True 285 lncRNA 0.43 1 3415003 3415287

Neighbor

gene id symbol gene type direction distance location
CI01000299_03341031_03366645 KLF7, KLF7A, KLF7B coding downstream 48275 3340766 ~ 3366728 (-)
CI01000299_03206204_03214303 MDH1B coding downstream 200700 3206185 ~ 3214303 (-)
CI01000299_03104921_03106385 NA coding downstream 308618 3104605 ~ 3106385 (-)
CI01000299_02951402_03057288 PARD3BA coding downstream 357715 2951402 ~ 3057288 (-)
CI01000299_02891830_02905146 NRP2B, NRP2A, NRP2 coding downstream 509857 2891574 ~ 2905146 (-)
CI01000299_03492360_03492614 NA coding upstream 76927 3492214 ~ 3493144 (-)
CI01000299_04136702_04142005 NA coding upstream 719533 4134820 ~ 4142125 (-)
CI01000299_04158468_04164223 MX2, MX1, MXB, MX, MXA coding upstream 742714 4158001 ~ 4164715 (-)
CI01000299_04171373_04175441 NA coding upstream 755862 4171149 ~ 4175441 (-)
CI01000299_04186183_04196219 MX1, MXB, MXA coding upstream 769680 4184967 ~ 4197884 (-)
G406928 NA non-coding downstream 13754 3373920 ~ 3401249 (-)
G406927 NA non-coding downstream 79796 3334043 ~ 3335207 (-)
G406941 NA non-coding downstream 98557 3312383 ~ 3316446 (-)
G406942 NA non-coding downstream 109813 3303752 ~ 3305190 (-)
G406932 NA non-coding downstream 119866 3289462 ~ 3295137 (-)
G406972 NA non-coding upstream 2797 3418084 ~ 3418322 (-)
G406978 NA non-coding upstream 21500 3436787 ~ 3437005 (-)
G406982 NA non-coding upstream 26801 3442088 ~ 3442324 (-)
G407005 NA non-coding upstream 47414 3462701 ~ 3462913 (-)
G407011 NA non-coding upstream 51972 3467259 ~ 3467752 (-)
G405053 NA other downstream 1396953 2017687 ~ 2018050 (-)
G404976 NA other downstream 1534015 1855639 ~ 1880988 (-)
G404784 NA other downstream 1755003 1659655 ~ 1660000 (-)
G404372 NA other downstream 2339112 1070607 ~ 1075891 (-)
CI01000299_00670925_00672195 NA other downstream 2742147 670680 ~ 673625 (-)
G407413 NA other upstream 1060707 4475994 ~ 4550721 (-)
CI01000299_04913779_04927715 NA other upstream 1510681 4913373 ~ 4927715 (-)
CI01000299_05428160_05443433 APP, APPA other upstream 2026050 5427661 ~ 5443433 (-)

Expression


Co-expression Network