G405690


Basic Information

Item Value
gene id G405690
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 3462378 ~ 3462582 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU466184
TTCACAGTGCAGCTTCTAAGGTGTTTTGTGTGGTTGCTAGGGCATTGCTAAGCAGTTGTTTAAGAATTCTCAATGATTTTAGCATGTTGCAATGCAGCTTCTAAGGTGTTCTGTGTCATTGCTAGGGTGTTGCTAGGCTGTTTAAGAATTCTGAATGTTTTTAGCATGTTGCTGTTCAGCTTTTATTGTATTCTGTGTGGTTACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU466184 True 205 lncRNA 0.39 1 3462378 3462582

Neighbor

gene id symbol gene type direction distance location
CI01000299_03453437_03453736 NA coding upstream 8169 3452300 ~ 3454209 (+)
CI01000299_03382616_03423028 NA coding upstream 38681 3382491 ~ 3423697 (+)
CI01000299_03366963_03373293 NA coding upstream 88696 3366818 ~ 3373682 (+)
CI01000299_03268500_03312490 HECW2 coding upstream 149050 3268193 ~ 3313328 (+)
CI01000299_03267154_03267336 NA coding upstream 194987 3267154 ~ 3267391 (+)
CI01000299_03478949_03486009 NA coding downstream 13506 3476088 ~ 3486009 (+)
CI01000299_03495286_03498691 NA coding downstream 31957 3494539 ~ 3498729 (+)
CI01000299_03594891_03678552 ERBB4 coding downstream 132309 3594891 ~ 3679612 (+)
CI01000299_03981006_04059237 ERBB4 coding downstream 518424 3981006 ~ 4059237 (+)
CI01000299_04105476_04115171 LANCL1 coding downstream 642894 4105476 ~ 4115227 (+)
G405663 NA non-coding upstream 51614 3410534 ~ 3410764 (+)
G405660 NA non-coding upstream 55568 3406585 ~ 3406810 (+)
G405621 NA non-coding upstream 127173 3334227 ~ 3335205 (+)
G405619 NA non-coding upstream 140945 3321195 ~ 3321433 (+)
G405618 NA non-coding upstream 141366 3320524 ~ 3321012 (+)
G405693 NA non-coding downstream 4936 3467518 ~ 3467780 (+)
G405695 NA non-coding downstream 6415 3468997 ~ 3469199 (+)
G405697 NA non-coding downstream 9793 3472375 ~ 3472615 (+)
G405575 NA non-coding downstream 42713 3505295 ~ 3535698 (+)
G405609 NA other upstream 307204 3154597 ~ 3155174 (+)
G403972 NA other upstream 2856028 604870 ~ 606350 (+)
G403609 NA other upstream 3051590 364139 ~ 410788 (+)
G403578 NA other upstream 3390107 35462 ~ 72271 (+)
CI01000299_04131136_04133439 PCNP other downstream 668676 4131060 ~ 4133941 (+)
G405842 NA other downstream 832951 4295533 ~ 4320141 (+)
CI01000299_04480751_04492829 NA other downstream 1027236 4480553 ~ 4493116 (+)
CI01000299_04703290_04704365 NA other downstream 1239800 4703071 ~ 4704780 (+)
G406096 NA other downstream 1461880 4924462 ~ 4927844 (+)

Expression


Co-expression Network