G405697


Basic Information

Item Value
gene id G405697
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 3472375 ~ 3472615 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU466191
CTATAATCACTGGCTTCTGGCAATGGCCGTACGTGAGTCTAGTTTCAGTGGAAGAGTGACCTCTGACCCGACGCATGACGTACATGGAAGCACAGAGGATAGAGCAAAACAAAACACCAGTCACGAATTAGAAGTCTAAAATGAGAATTTTTAAAGAGAAATACCAGAGGATTTCAATATATGAGAAGAGGAGCTTGAGTTTGTTGCCCAGTCCTATTTGTTTGAATCGTGAGAGGCGTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU466191 True 241 lncRNA 0.43 1 3472375 3472615

Neighbor

gene id symbol gene type direction distance location
CI01000299_03453437_03453736 NA coding upstream 18166 3452300 ~ 3454209 (+)
CI01000299_03382616_03423028 NA coding upstream 48678 3382491 ~ 3423697 (+)
CI01000299_03366963_03373293 NA coding upstream 98693 3366818 ~ 3373682 (+)
CI01000299_03268500_03312490 HECW2 coding upstream 159047 3268193 ~ 3313328 (+)
CI01000299_03267154_03267336 NA coding upstream 204984 3267154 ~ 3267391 (+)
CI01000299_03478949_03486009 NA coding downstream 3473 3476088 ~ 3486009 (+)
CI01000299_03495286_03498691 NA coding downstream 21924 3494539 ~ 3498729 (+)
CI01000299_03594891_03678552 ERBB4 coding downstream 122276 3594891 ~ 3679612 (+)
CI01000299_03981006_04059237 ERBB4 coding downstream 508391 3981006 ~ 4059237 (+)
CI01000299_04105476_04115171 LANCL1 coding downstream 632861 4105476 ~ 4115227 (+)
G405695 NA non-coding upstream 3176 3468997 ~ 3469199 (+)
G405693 NA non-coding upstream 4595 3467518 ~ 3467780 (+)
G405690 NA non-coding upstream 9793 3462378 ~ 3462582 (+)
G405663 NA non-coding upstream 61611 3410534 ~ 3410764 (+)
G405660 NA non-coding upstream 65565 3406585 ~ 3406810 (+)
G405575 NA non-coding downstream 32680 3505295 ~ 3535698 (+)
G405579 NA non-coding downstream 79699 3552314 ~ 3557103 (+)
G405710 NA non-coding downstream 225813 3698428 ~ 3725180 (+)
G405742 NA non-coding downstream 305418 3778033 ~ 3783926 (+)
G405609 NA other upstream 317201 3154597 ~ 3155174 (+)
G403972 NA other upstream 2866025 604870 ~ 606350 (+)
G403609 NA other upstream 3061587 364139 ~ 410788 (+)
G403578 NA other upstream 3400104 35462 ~ 72271 (+)
CI01000299_04131136_04133439 PCNP other downstream 658643 4131060 ~ 4133941 (+)
G405842 NA other downstream 822918 4295533 ~ 4320141 (+)
CI01000299_04480751_04492829 NA other downstream 1017203 4480553 ~ 4493116 (+)
CI01000299_04703290_04704365 NA other downstream 1229767 4703071 ~ 4704780 (+)
G406096 NA other downstream 1451847 4924462 ~ 4927844 (+)

Expression


Co-expression Network