Gene
RNA
| Item | Value |
|---|---|
| gene id | G407117 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000299 |
| NCBI id | null |
| chromosome length | 6567443 |
| location | 3637790 ~ 3643952 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU467769 | True | 526 | lncRNA | 0.48 | 5 | 3637790 | 3643952 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000299_03492360_03492614 | NA | coding | downstream | 144646 | 3492214 ~ 3493144 (-) |
| CI01000299_03341031_03366645 | KLF7, KLF7A, KLF7B | coding | downstream | 271062 | 3340766 ~ 3366728 (-) |
| CI01000299_03206204_03214303 | MDH1B | coding | downstream | 423487 | 3206185 ~ 3214303 (-) |
| CI01000299_03104921_03106385 | NA | coding | downstream | 531405 | 3104605 ~ 3106385 (-) |
| CI01000299_02951402_03057288 | PARD3BA | coding | downstream | 580502 | 2951402 ~ 3057288 (-) |
| CI01000299_04136702_04142005 | NA | coding | upstream | 490868 | 4134820 ~ 4142125 (-) |
| CI01000299_04158468_04164223 | MX2, MX1, MXB, MX, MXA | coding | upstream | 514049 | 4158001 ~ 4164715 (-) |
| CI01000299_04171373_04175441 | NA | coding | upstream | 527197 | 4171149 ~ 4175441 (-) |
| CI01000299_04186183_04196219 | MX1, MXB, MXA | coding | upstream | 541015 | 4184967 ~ 4197884 (-) |
| CI01000299_04227918_04239792 | EFNB2B | coding | upstream | 583568 | 4227520 ~ 4239792 (-) |
| G407112 | NA | non-coding | downstream | 3209 | 3632421 ~ 3634581 (-) |
| G407030 | NA | non-coding | downstream | 77772 | 3504906 ~ 3560018 (-) |
| G406993 | NA | non-coding | downstream | 156248 | 3481099 ~ 3481542 (-) |
| G407023 | NA | non-coding | downstream | 159806 | 3477600 ~ 3477984 (-) |
| G407020 | NA | non-coding | downstream | 161994 | 3475530 ~ 3475796 (-) |
| G407119 | NA | non-coding | upstream | 642 | 3644594 ~ 3655355 (-) |
| G407232 | NA | non-coding | upstream | 270069 | 3914021 ~ 3920821 (-) |
| G407280 | NA | non-coding | upstream | 390780 | 4034732 ~ 4037784 (-) |
| G407303 | NA | non-coding | upstream | 405590 | 4049542 ~ 4049827 (-) |
| G407306 | NA | non-coding | upstream | 422253 | 4066205 ~ 4066648 (-) |
| G405053 | NA | other | downstream | 1619740 | 2017687 ~ 2018050 (-) |
| G404976 | NA | other | downstream | 1756802 | 1855639 ~ 1880988 (-) |
| G404784 | NA | other | downstream | 1977790 | 1659655 ~ 1660000 (-) |
| G404372 | NA | other | downstream | 2561899 | 1070607 ~ 1075891 (-) |
| CI01000299_00670925_00672195 | NA | other | downstream | 2964934 | 670680 ~ 673625 (-) |
| G407413 | NA | other | upstream | 832042 | 4475994 ~ 4550721 (-) |
| CI01000299_04913779_04927715 | NA | other | upstream | 1282016 | 4913373 ~ 4927715 (-) |
| CI01000299_05428160_05443433 | APP, APPA | other | upstream | 1797385 | 5427661 ~ 5443433 (-) |
