G407119


Basic Information

Item Value
gene id G407119
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 3644594 ~ 3655355 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU467773
AAGGCCGACTCGATTATGTCATTCGTAGTACTTCATGGGAGTGGGCGGAGCTAAAGGGCACTTTTGGTGCGTTTTGCTTGTTTCAACTCTGATTAGTGGAATTTTCTGTACAGAATCATGGGAAATGTCGTTTTTCACCACAAATTCTGCTGTTAAACATGATTATTTTAATTATAAATCACGATTATTTGATTATAAGCTAACGGCTTCAACGGATTCAACAACTACTATCGGTCAACAACCTCTTAGCTCACAGTAAGGTTTATAAATTAGCGTTAAAAATCAATTTCCCTATGGAGAAACTGAATGGAGTTTTTACTTCCGGAACCTGGATGTTGCACTCTATACATTCATAATGTGGAAATGAGCAACCTGAATATTCTACTAAATAACTTCTTTTGTGCCCCCCAGAATGATGAAAAATCAATGTTTTGAGCAACAGCAGAGTATAGATGATGACAGAATTTTCATTTCTGCGTAAACTATTCCCTTCTCAAATACACATACATACTAAAATAAACATTTTCTGAAGTCAAAAGTCATATTCTAAAATCAAAGGCTGCATACAAAAACACACAACTTCCTGCAGTATTGACAGGGATACTGTCTCACTGATAACAACAACATGTGAAATCAATCTTACCTTTGCGATCTGCACGCACCAGTTGAGCAGCAGCTGGGAGCCGATGTTCTCCTGGTGCTCATGAACATAGTCCAGCAGACAGCCGTGGGGCATGAGCTGAGTTACCAGCTGAAGAGTGGGACTCAAGCAGACCCCCAACAGACGCACTAGATGAGGATGCTCCATGCTGGCCATGATCAGCGCCTCATCCATAAACTCCACATTGGCTTTAGGTCCTGTACTTTCATTGAGTATCTTTATAGCCACTGGAATCTTCACTGTTTCTCCTTCTGGAACCCAGATTCCCTTATAGACCATGCCAAAGGCTCCACTTCCCAGAATCTTGACCCTCTTGAGCTCAGTTTCCTTCAGTATCCGCAGCTGAGCCTGGTTTGGTGCTGTACCACTGGGCGTCAACGGCTCCACCAACTCAGTCTCCAGGAAACGACGTAAAGCTCTCTTCTTCTTAATGCTCTTTCTGCGGATGTAAACAGCCACACCAAGAGCTATGATGACCATCACAAAGAGAGCCCCGATTAACCCAGCCGCAATCAGAGGAGTCCTGTCCAACATGCCAACACAATCTTGTACTCGGGGTCCAGTACAACCCTGGGTGCAGTTGGGGTGGCAGGGATGGCACTCGTTGTTGGTCTCAGCATATTTGAAGATGAAGCTGTTTGCTCCCTGCAGACCATCAGGGCACTTCTCCACACAGTTGGGTCCATCTTTCAGATGCAAACACTTCACACAGTGATCTGGACCCGGGCCATGGCAGGTCAAACTTTTCTCTCCGGCTTTTTCACACTGGCTGTCACACTCAACACAAACGGAGCCATTGGCGTACTCTCGAACATCCCTTGAACAGATAAAGAACAATGTGTTATAAGCCATTTATTTGATATATAATTTATTTACAACATGTAGTGTACTTTTTTTTTTTAAGTACATACCAAAATGCATTGAATGGTTTTTTTGAGTAATATGATTAATATGCACTGTTTGGATGGCATTGAAGGACTTTTCACATAGCGACCAGGGGCTAGTGTGATTAACTCCAAATCTAGGTCAATTATTTAAACAGACATACAAGATAAGCTATACAAATCCATGAAAGCGGAAACAGCTTAAGGAGCTGTCAATACTACTTTCATCTGTTTCTGTTGTTGACAGTTTCATTGAGAGTATTAGAAAAGCGCAAAGTAGGAAAGCTTGTATAATTACATAATGAACCGTTATGTTTTTATTACCTTAGAATGAGCCATTTATATCTACATACACCGCGGGTCCCCCCTCCATGTCAAGTCGTCATTTTGCATCTGCATGTTTCTACAGTAGCCCTAAATGGACAAACGCTCTACAGAGTGCGTTTCATCATGTTGTTCTTATTCTAAATGGTTCGTGTTTTCAGAGGCAGCTTGCATCGTCACTACGTTGAATACGCACAAAGAAGTAGTAGTAGTAGTAGTAGTAGTGGTAGTAGTAGTCATCTGGTTTATTAGAGGCAGAGACCGTTCTTTGTTAGAAGTAAGAAGAAACGTCATTGCTTGACTGGCTAATGTACTCTCTGCTGTCTCAGACGACATCTTTGACTTGTGTCGGCCAGACGGCCACCATAGCTTCTAAATTCATGTGAAAGGGAGGGGTGAGCTGCCGTTGGTTGCAGTTCGCAACCTCAACGCTAGATGCCCCTAAAATTTACACACTGCACCTTTACGGCATGAAAGAAACATCTAAGAAGTGAACTTAAGAACTTAAGAACTTTCACTGTAAAGATTGGGAATAATTGTTCTTCTGCTGCTCCTGTAAGTTACGGGGCTCTATTTTAGGGCCGTTTCTTTTTTCTCTATACATGATTCCACTGGGCTCTATATTTAATAAATTTGGCATTTCATATCATAGTTATGATGATGACATGCAGTTGTACCTGCCTTTCAAAGCAGGAAAGCTGAAAAATTCTTTGCTGAATTGCCTTGAGGAGGTGAAATGTTGGATGAACTCGAACACATTGTTTACTGCAAAAACAAGTCTGGGGCAGTTTTCTTCCTATGTAAAAAGTCATGCCACTAACTTAGGCATAATTTTTTTAACAAAAACCTTGAATAATGCAAAGAAAACATGTTTATATTCTTTTATAAACAACATGATACTAATGTTTTAACTTGAGGAGAGTTAAAGGTCCAGTAAGCAATTTCTGAGAAAAGCTGTTGATATTTGAAATCACCACAACAAACACATCCTATCCAAAAGGATCACACCCCTATCTTGATAGCTCCACCCCCAAATTGGCTACAAGTGTGTTTCGATGCTCTGTCTGATCCATTTTCAACAGCATTGGTCCTTTAAGAAATCAATATTTGGTGAAATAACCCTGCTTTCCAATTACAGCTTTCATGTGTCTTGGCATTCTCTCTACAAGTCGGTCACATTGCTGTTGGGTGACTTTATGCCACTTCTGGCACAAAAATTCAAGCAGCTCTGCTTTGTTTGGCGGGTCGTGACCTTGTGTCCTTCCTCTTGATCACATTCCAGAGGTTTCAATGGGGTTCAGGTGACAGGTCTGGAGTTTGGGCTGACCATGACAGGGTCTTGATCTGGTGGTCCTCCACCCACACCTTTATTGGCCTGAATGTGTGGCATAGAGCAGGAAAAACCAATCCTTCGAGTTGGGGAACACTGTCAGAGCAGAAGGAAGCAAGTTTTCTTCCAGGATAAACTTGTACATGGCTTTGTTTTCTTTGCATCATTCGAGGTCTGAAAACATGGCATCTTTTTTGTTATTTTGACCAGATGTCATTTTCTGCAAATAAATGCTCTAAATGACAATATTTTTATTTTAAAAAAGGAAGAAATGTTGTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU467773 True 3479 lncRNA 0.41 7 3644594 3655355

Neighbor

gene id symbol gene type direction distance location
CI01000299_03492360_03492614 NA coding downstream 151450 3492214 ~ 3493144 (-)
CI01000299_03341031_03366645 KLF7, KLF7A, KLF7B coding downstream 277866 3340766 ~ 3366728 (-)
CI01000299_03206204_03214303 MDH1B coding downstream 430291 3206185 ~ 3214303 (-)
CI01000299_03104921_03106385 NA coding downstream 538209 3104605 ~ 3106385 (-)
CI01000299_02951402_03057288 PARD3BA coding downstream 587306 2951402 ~ 3057288 (-)
CI01000299_04136702_04142005 NA coding upstream 479465 4134820 ~ 4142125 (-)
CI01000299_04158468_04164223 MX2, MX1, MXB, MX, MXA coding upstream 502646 4158001 ~ 4164715 (-)
CI01000299_04171373_04175441 NA coding upstream 515794 4171149 ~ 4175441 (-)
CI01000299_04186183_04196219 MX1, MXB, MXA coding upstream 529612 4184967 ~ 4197884 (-)
CI01000299_04227918_04239792 EFNB2B coding upstream 572165 4227520 ~ 4239792 (-)
G407117 NA non-coding downstream 642 3637790 ~ 3643952 (-)
G407112 NA non-coding downstream 10013 3632421 ~ 3634581 (-)
G407030 NA non-coding downstream 84576 3504906 ~ 3560018 (-)
G406993 NA non-coding downstream 163052 3481099 ~ 3481542 (-)
G407023 NA non-coding downstream 166610 3477600 ~ 3477984 (-)
G407232 NA non-coding upstream 258666 3914021 ~ 3920821 (-)
G407280 NA non-coding upstream 379377 4034732 ~ 4037784 (-)
G407303 NA non-coding upstream 394187 4049542 ~ 4049827 (-)
G407306 NA non-coding upstream 410850 4066205 ~ 4066648 (-)
G407288 NA non-coding upstream 466324 4121679 ~ 4127640 (-)
G405053 NA other downstream 1626544 2017687 ~ 2018050 (-)
G404976 NA other downstream 1763606 1855639 ~ 1880988 (-)
G404784 NA other downstream 1984594 1659655 ~ 1660000 (-)
G404372 NA other downstream 2568703 1070607 ~ 1075891 (-)
CI01000299_00670925_00672195 NA other downstream 2971738 670680 ~ 673625 (-)
G407413 NA other upstream 820639 4475994 ~ 4550721 (-)
CI01000299_04913779_04927715 NA other upstream 1270613 4913373 ~ 4927715 (-)
CI01000299_05428160_05443433 APP, APPA other upstream 1785982 5427661 ~ 5443433 (-)

Expression


Co-expression Network