G405797


Basic Information

Item Value
gene id G405797
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 4076805 ~ 4077037 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU466301
ATGAACACGCATTTTGATTGGTAACGATAGTCATAAGTCATTTCATGACGACAGACGTAACACGACACTGTCATTATTTTTACGCCAGCTAGAGGGTGCATGACTTTAAAACATAAATATAGGTCATAATAGGGTGGTTGAAAAATGGCCTATAGGGTCATTTTGTTTTGGAGGAGGACAGTCTCATAATTTGGCAGCAGGTTTATTAGGCTGCTGTCACTTTAAGACCTGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU466301 True 233 lncRNA 0.39 1 4076805 4077037

Neighbor

gene id symbol gene type direction distance location
CI01000299_03981006_04059237 ERBB4 coding upstream 17568 3981006 ~ 4059237 (+)
CI01000299_03594891_03678552 ERBB4 coding upstream 397193 3594891 ~ 3679612 (+)
CI01000299_03495286_03498691 NA coding upstream 578076 3494539 ~ 3498729 (+)
CI01000299_03478949_03486009 NA coding upstream 590796 3476088 ~ 3486009 (+)
CI01000299_03453437_03453736 NA coding upstream 622596 3452300 ~ 3454209 (+)
CI01000299_04105476_04115171 LANCL1 coding downstream 28439 4105476 ~ 4115227 (+)
CI01000299_04122601_04126314 MLE3, MYLZ3, MYL1 coding downstream 45564 4122601 ~ 4126381 (+)
CI01000299_04131136_04133439 PCNP coding downstream 54023 4131060 ~ 4133941 (+)
CI01000299_04259743_04263032 ENG1B, EN1 coding downstream 181884 4258921 ~ 4263493 (+)
CI01000299_04269257_04269673 NA coding downstream 191430 4268467 ~ 4269765 (+)
G405569 NA non-coding upstream 11240 4065131 ~ 4065565 (+)
G405578 NA non-coding upstream 163847 3893020 ~ 3912958 (+)
G405742 NA non-coding upstream 292879 3778033 ~ 3783926 (+)
G405710 NA non-coding upstream 351625 3698428 ~ 3725180 (+)
G405579 NA non-coding upstream 519702 3552314 ~ 3557103 (+)
G405568 NA non-coding downstream 1938 4078975 ~ 4116184 (+)
G405573 NA non-coding downstream 51957 4128994 ~ 4129600 (+)
G405577 NA non-coding downstream 102813 4179850 ~ 4196335 (+)
G405815 NA non-coding downstream 142404 4219441 ~ 4219649 (+)
G405817 NA non-coding downstream 146124 4223161 ~ 4223448 (+)
G405609 NA other upstream 921631 3154597 ~ 3155174 (+)
G403972 NA other upstream 3470455 604870 ~ 606350 (+)
G403609 NA other upstream 3666017 364139 ~ 410788 (+)
G403578 NA other upstream 4004534 35462 ~ 72271 (+)
G405842 NA other downstream 218496 4295533 ~ 4320141 (+)
CI01000299_04480751_04492829 NA other downstream 412781 4480553 ~ 4493116 (+)
CI01000299_04703290_04704365 NA other downstream 625345 4703071 ~ 4704780 (+)
G406096 NA other downstream 847425 4924462 ~ 4927844 (+)

Expression


Co-expression Network