G405817


Basic Information

Item Value
gene id G405817
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 4223161 ~ 4223448 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU466321
CGTCTCCAAAAGTTATTCAATATGGCATAAGGCATTGTGGTCTTTGAGTAATTGTTCCTGATTTTTAACCAGCTGTAAATGTTTGGGGCAACCAGAAAAGGTCTTTTGTCATTTCTAGTCCAGATGTGTGCTTTCTTCCGGATATACAACTTCAGCTGTTCTCTCTGATTTAGTGAAGCATTGTGTGTTGCGGATGATGTATTTCAGTCATTGTAAGTAGTTTTTAGGTAAAGAGAGTGGAATTAAAACTCTCAAGTCATCCATACTTGGCAGAATATTGGATCTTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU466321 True 288 lncRNA 0.37 1 4223161 4223448

Neighbor

gene id symbol gene type direction distance location
CI01000299_04131136_04133439 PCNP coding upstream 89359 4131060 ~ 4133941 (+)
CI01000299_04122601_04126314 MLE3, MYLZ3, MYL1 coding upstream 96780 4122601 ~ 4126381 (+)
CI01000299_04105476_04115171 LANCL1 coding upstream 107934 4105476 ~ 4115227 (+)
CI01000299_03981006_04059237 ERBB4 coding upstream 163924 3981006 ~ 4059237 (+)
CI01000299_03594891_03678552 ERBB4 coding upstream 543549 3594891 ~ 3679612 (+)
CI01000299_04259743_04263032 ENG1B, EN1 coding downstream 35473 4258921 ~ 4263493 (+)
CI01000299_04269257_04269673 NA coding downstream 45019 4268467 ~ 4269765 (+)
CI01000299_04472181_04474247 NA coding downstream 247508 4470956 ~ 4474271 (+)
CI01000299_04480751_04492829 NA coding downstream 257105 4480553 ~ 4493116 (+)
CI01000299_04496757_04504238 NA coding downstream 272938 4496386 ~ 4504483 (+)
G405815 NA non-coding upstream 3512 4219441 ~ 4219649 (+)
G405577 NA non-coding upstream 26826 4179850 ~ 4196335 (+)
G405573 NA non-coding upstream 93561 4128994 ~ 4129600 (+)
G405568 NA non-coding upstream 106977 4078975 ~ 4116184 (+)
G405797 NA non-coding upstream 146124 4076805 ~ 4077037 (+)
G405818 NA non-coding downstream 1367 4224815 ~ 4225273 (+)
G405825 NA non-coding downstream 17412 4240860 ~ 4241092 (+)
G405554 NA non-coding downstream 17753 4241201 ~ 4242968 (+)
G405828 NA non-coding downstream 30314 4253762 ~ 4254064 (+)
G405829 NA non-coding downstream 31266 4254714 ~ 4255014 (+)
G405609 NA other upstream 1067987 3154597 ~ 3155174 (+)
G403972 NA other upstream 3616811 604870 ~ 606350 (+)
G403609 NA other upstream 3812373 364139 ~ 410788 (+)
G403578 NA other upstream 4150890 35462 ~ 72271 (+)
G405842 NA other downstream 72085 4295533 ~ 4320141 (+)
CI01000299_04703290_04704365 NA other downstream 478934 4703071 ~ 4704780 (+)
G406096 NA other downstream 701014 4924462 ~ 4927844 (+)
G406244 NA other downstream 1147733 5371181 ~ 5373579 (+)

Expression


Co-expression Network