G405828


Basic Information

Item Value
gene id G405828
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 4253762 ~ 4254064 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU466335
GTCTGGGGACTGAGGAGACAAGTTGCTCAAGTTTAGGAATAGGAATGTTGTCCCATTCTTGTCTAATACAGGCTTCTAGTTGCTCAACTGTCTTAGGTCTTCTTTGTCGCATCTTCCTCTTTATGATGCGCCAAATGTTTTCTATGGGTGAAAGATCTGGACTGCAGGCTGGCCATTTCAGTACCCGGATCCTTCTTCTACGCAGCCATGATGTTGTAATTGATGCAGTATGTGGTCTGGCATTGTCATGTTGGAAAATGCAAGGTCTCCCCTGAAAGAGACGACGTCTGGATGGAAGCATAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU466335 True 303 lncRNA 0.46 1 4253762 4254064

Neighbor

gene id symbol gene type direction distance location
CI01000299_04131136_04133439 PCNP coding upstream 119960 4131060 ~ 4133941 (+)
CI01000299_04122601_04126314 MLE3, MYLZ3, MYL1 coding upstream 127381 4122601 ~ 4126381 (+)
CI01000299_04105476_04115171 LANCL1 coding upstream 138535 4105476 ~ 4115227 (+)
CI01000299_03981006_04059237 ERBB4 coding upstream 194525 3981006 ~ 4059237 (+)
CI01000299_03594891_03678552 ERBB4 coding upstream 574150 3594891 ~ 3679612 (+)
CI01000299_04259743_04263032 ENG1B, EN1 coding downstream 4857 4258921 ~ 4263493 (+)
CI01000299_04269257_04269673 NA coding downstream 14403 4268467 ~ 4269765 (+)
CI01000299_04472181_04474247 NA coding downstream 216892 4470956 ~ 4474271 (+)
CI01000299_04480751_04492829 NA coding downstream 226489 4480553 ~ 4493116 (+)
CI01000299_04496757_04504238 NA coding downstream 242322 4496386 ~ 4504483 (+)
G405554 NA non-coding upstream 10794 4241201 ~ 4242968 (+)
G405825 NA non-coding upstream 12670 4240860 ~ 4241092 (+)
G405818 NA non-coding upstream 28489 4224815 ~ 4225273 (+)
G405817 NA non-coding upstream 30314 4223161 ~ 4223448 (+)
G405815 NA non-coding upstream 34113 4219441 ~ 4219649 (+)
G405829 NA non-coding downstream 650 4254714 ~ 4255014 (+)
G405831 NA non-coding downstream 23314 4277378 ~ 4277736 (+)
G405833 NA non-coding downstream 27360 4281424 ~ 4281630 (+)
G405837 NA non-coding downstream 31160 4285224 ~ 4285560 (+)
G405905 NA non-coding downstream 134387 4388451 ~ 4388657 (+)
G405609 NA other upstream 1098588 3154597 ~ 3155174 (+)
G403972 NA other upstream 3647412 604870 ~ 606350 (+)
G403609 NA other upstream 3842974 364139 ~ 410788 (+)
G403578 NA other upstream 4181491 35462 ~ 72271 (+)
G405842 NA other downstream 41469 4295533 ~ 4320141 (+)
CI01000299_04703290_04704365 NA other downstream 448318 4703071 ~ 4704780 (+)
G406096 NA other downstream 670398 4924462 ~ 4927844 (+)
G406244 NA other downstream 1117117 5371181 ~ 5373579 (+)

Expression


Co-expression Network