G405831


Basic Information

Item Value
gene id G405831
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 4277378 ~ 4277736 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU466338
CGCATTTTCATATCACTACCGAAACAGTGTATGTTTTACTCCATTGGCTGAGACTGATTTTAGCCACACTTCTACATTTATGATCAGGAAATATTCCTGTGTCCCTCCCTCTCATAGCCTCTCTTTCATAGTAGATAGGACCATCATTTTGAGTTAAATGTGTTCAAAAGTCTGAAAATCTCTGTGTAACTTTAAGGAACATCACTACCAAACACCTTTTTTTCTACAATTAAGCAAACTTTTTTGTTCTGTTTTTTGGGGGTTATATGATAAAATGTATTTTTTATGTGTGTACAACAGTTTAGAACTGTGCGCTGATTATCATCTTTGAGCCAGCCTCAAAATTATCTAAAATTGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU466338 True 359 lncRNA 0.35 1 4277378 4277736

Neighbor

gene id symbol gene type direction distance location
CI01000299_04269257_04269673 NA coding upstream 7613 4268467 ~ 4269765 (+)
CI01000299_04259743_04263032 ENG1B, EN1 coding upstream 13885 4258921 ~ 4263493 (+)
CI01000299_04131136_04133439 PCNP coding upstream 143576 4131060 ~ 4133941 (+)
CI01000299_04122601_04126314 MLE3, MYLZ3, MYL1 coding upstream 150997 4122601 ~ 4126381 (+)
CI01000299_04105476_04115171 LANCL1 coding upstream 162151 4105476 ~ 4115227 (+)
CI01000299_04472181_04474247 NA coding downstream 193220 4470956 ~ 4474271 (+)
CI01000299_04480751_04492829 NA coding downstream 202817 4480553 ~ 4493116 (+)
CI01000299_04496757_04504238 NA coding downstream 218650 4496386 ~ 4504483 (+)
CI01000299_04513358_04524537 NA coding downstream 235622 4513358 ~ 4526677 (+)
CI01000299_04532498_04539703 NA coding downstream 254362 4532098 ~ 4539919 (+)
G405829 NA non-coding upstream 22364 4254714 ~ 4255014 (+)
G405828 NA non-coding upstream 23314 4253762 ~ 4254064 (+)
G405554 NA non-coding upstream 34410 4241201 ~ 4242968 (+)
G405825 NA non-coding upstream 36286 4240860 ~ 4241092 (+)
G405818 NA non-coding upstream 52105 4224815 ~ 4225273 (+)
G405833 NA non-coding downstream 3688 4281424 ~ 4281630 (+)
G405837 NA non-coding downstream 7488 4285224 ~ 4285560 (+)
G405905 NA non-coding downstream 110715 4388451 ~ 4388657 (+)
G405906 NA non-coding downstream 111978 4389714 ~ 4390144 (+)
G405908 NA non-coding downstream 113395 4391131 ~ 4391513 (+)
G405609 NA other upstream 1122204 3154597 ~ 3155174 (+)
G403972 NA other upstream 3671028 604870 ~ 606350 (+)
G403609 NA other upstream 3866590 364139 ~ 410788 (+)
G403578 NA other upstream 4205107 35462 ~ 72271 (+)
G405842 NA other downstream 17797 4295533 ~ 4320141 (+)
CI01000299_04703290_04704365 NA other downstream 424646 4703071 ~ 4704780 (+)
G406096 NA other downstream 646726 4924462 ~ 4927844 (+)
G406244 NA other downstream 1093445 5371181 ~ 5373579 (+)

Expression


Co-expression Network