G405837


Basic Information

Item Value
gene id G405837
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 4285224 ~ 4285560 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU466344
TGTCAATCACAGCTGTCAATCATGATGTCACACCCACATTTTTATAGCATCAAAAAAAAAAAAACAAAAAAAAAACGAACACTTGAACTTACATCAGCGTGATAAAAATTACATGAAATGACAGAAACCATCTTTGGAAAAAAATTATTTGAAGTGTAATTTAATTGTTTAGTTTGTCTCAAGTCCCATTAAATTACATGGAGAGGGCGGGGTTTATGACCTATACTGGGACCAACCACCTGGGGGCGACCCAGGCGCTTTGGCCTCACTTTTCAGGACTTGTGCAACCCGCCTAAAACGACTAAAAATGTTATATTCTGCTACCAGGCCAGTAGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU466344 True 337 lncRNA 0.38 1 4285224 4285560

Neighbor

gene id symbol gene type direction distance location
CI01000299_04269257_04269673 NA coding upstream 15459 4268467 ~ 4269765 (+)
CI01000299_04259743_04263032 ENG1B, EN1 coding upstream 21731 4258921 ~ 4263493 (+)
CI01000299_04131136_04133439 PCNP coding upstream 151422 4131060 ~ 4133941 (+)
CI01000299_04122601_04126314 MLE3, MYLZ3, MYL1 coding upstream 158843 4122601 ~ 4126381 (+)
CI01000299_04105476_04115171 LANCL1 coding upstream 169997 4105476 ~ 4115227 (+)
CI01000299_04472181_04474247 NA coding downstream 185396 4470956 ~ 4474271 (+)
CI01000299_04480751_04492829 NA coding downstream 194993 4480553 ~ 4493116 (+)
CI01000299_04496757_04504238 NA coding downstream 210826 4496386 ~ 4504483 (+)
CI01000299_04513358_04524537 NA coding downstream 227798 4513358 ~ 4526677 (+)
CI01000299_04532498_04539703 NA coding downstream 246538 4532098 ~ 4539919 (+)
G405833 NA non-coding upstream 3594 4281424 ~ 4281630 (+)
G405831 NA non-coding upstream 7488 4277378 ~ 4277736 (+)
G405829 NA non-coding upstream 30210 4254714 ~ 4255014 (+)
G405828 NA non-coding upstream 31160 4253762 ~ 4254064 (+)
G405554 NA non-coding upstream 42256 4241201 ~ 4242968 (+)
G405905 NA non-coding downstream 102891 4388451 ~ 4388657 (+)
G405906 NA non-coding downstream 104154 4389714 ~ 4390144 (+)
G405908 NA non-coding downstream 105571 4391131 ~ 4391513 (+)
G405909 NA non-coding downstream 107904 4393464 ~ 4395443 (+)
G405910 NA non-coding downstream 115019 4400579 ~ 4403306 (+)
G405609 NA other upstream 1130050 3154597 ~ 3155174 (+)
G403972 NA other upstream 3678874 604870 ~ 606350 (+)
G403609 NA other upstream 3874436 364139 ~ 410788 (+)
G403578 NA other upstream 4212953 35462 ~ 72271 (+)
G405842 NA other downstream 9973 4295533 ~ 4320141 (+)
CI01000299_04703290_04704365 NA other downstream 416822 4703071 ~ 4704780 (+)
G406096 NA other downstream 638902 4924462 ~ 4927844 (+)
G406244 NA other downstream 1085621 5371181 ~ 5373579 (+)

Expression


Co-expression Network