G405906


Basic Information

Item Value
gene id G405906
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 4389714 ~ 4390144 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU466423
GACCCTGTAGCCGGTTCACCACTGTTCCTTCCTTGGAGCACTTTTGATAGATACTGACCACTGCAGACCAGGAACACCCCACAAGAGCTGCAGTTTTGGAGATGCTCTGACCCAGTCGTCTAGCCATCACAATTTGGCCCTTGTCAAACTCGCTCAAATCCTTACGCTTGCCCATTTTTCCTGCTTCTAACACATCAACTTTGAGGACAAAATGTTCACTTGCTGCCTAATATATCCACCCACTAACAGGTGCCGTGATGAAGAGATAATATTCACTTCACCTGTCAGTGCTCATAATGTTATGCATGATCGGTGTATATGTTGAGGCATTAGGACCCCCACAGACCACAGGGTGAGCAGCGCCCCCTGCTGGCCTCACTAACACCTCTGCCAGCAGCAACCTACAGCAGATCATCATGCTACTTCTTTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU466423 True 431 lncRNA 0.49 1 4389714 4390144

Neighbor

gene id symbol gene type direction distance location
CI01000299_04269257_04269673 NA coding upstream 119949 4268467 ~ 4269765 (+)
CI01000299_04259743_04263032 ENG1B, EN1 coding upstream 126221 4258921 ~ 4263493 (+)
CI01000299_04131136_04133439 PCNP coding upstream 255912 4131060 ~ 4133941 (+)
CI01000299_04122601_04126314 MLE3, MYLZ3, MYL1 coding upstream 263333 4122601 ~ 4126381 (+)
CI01000299_04105476_04115171 LANCL1 coding upstream 274487 4105476 ~ 4115227 (+)
CI01000299_04472181_04474247 NA coding downstream 80812 4470956 ~ 4474271 (+)
CI01000299_04480751_04492829 NA coding downstream 90409 4480553 ~ 4493116 (+)
CI01000299_04496757_04504238 NA coding downstream 106242 4496386 ~ 4504483 (+)
CI01000299_04513358_04524537 NA coding downstream 123214 4513358 ~ 4526677 (+)
CI01000299_04532498_04539703 NA coding downstream 141954 4532098 ~ 4539919 (+)
G405905 NA non-coding upstream 1057 4388451 ~ 4388657 (+)
G405837 NA non-coding upstream 104154 4285224 ~ 4285560 (+)
G405833 NA non-coding upstream 108084 4281424 ~ 4281630 (+)
G405831 NA non-coding upstream 111978 4277378 ~ 4277736 (+)
G405829 NA non-coding upstream 134700 4254714 ~ 4255014 (+)
G405908 NA non-coding downstream 987 4391131 ~ 4391513 (+)
G405909 NA non-coding downstream 3320 4393464 ~ 4395443 (+)
G405910 NA non-coding downstream 10435 4400579 ~ 4403306 (+)
G405912 NA non-coding downstream 24648 4414792 ~ 4415011 (+)
G405876 NA non-coding downstream 28160 4418304 ~ 4448995 (+)
G405842 NA other upstream 69573 4295533 ~ 4320141 (+)
G405609 NA other upstream 1234540 3154597 ~ 3155174 (+)
G403972 NA other upstream 3783364 604870 ~ 606350 (+)
G403609 NA other upstream 3978926 364139 ~ 410788 (+)
CI01000299_04703290_04704365 NA other downstream 312238 4703071 ~ 4704780 (+)
G406096 NA other downstream 534318 4924462 ~ 4927844 (+)
G406244 NA other downstream 981037 5371181 ~ 5373579 (+)
G406161 NA other downstream 1847694 6237838 ~ 6300508 (+)

Expression


Co-expression Network