G405931


Basic Information

Item Value
gene id G405931
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 4453592 ~ 4453869 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU466452
GCCTGGTCTGATGAATCATGTGGATGGCCGGGTGCGTGTGCGTCGCTTACCTGGGGAACACATGGCACCAGGATGCACTATGGGAAGAAGGCAAGCCGGCGGAGGCAGTGTGATGCTTTGGGCAATGTTCTGCTGGGAAACCTTGGGTCCTGCCATCCATGTGGATGTTACTTTGACACGTACCACCTACCTAAGCGTTGTTGCTGACCATGTACACCTTTTCATGGAAACTATATTCCCTGGAGGCTGTGGCCTCTTTCAGCAGGATAATGCGCCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU466452 True 278 lncRNA 0.54 1 4453592 4453869

Neighbor

gene id symbol gene type direction distance location
CI01000299_04269257_04269673 NA coding upstream 183827 4268467 ~ 4269765 (+)
CI01000299_04259743_04263032 ENG1B, EN1 coding upstream 190099 4258921 ~ 4263493 (+)
CI01000299_04131136_04133439 PCNP coding upstream 319790 4131060 ~ 4133941 (+)
CI01000299_04122601_04126314 MLE3, MYLZ3, MYL1 coding upstream 327211 4122601 ~ 4126381 (+)
CI01000299_04105476_04115171 LANCL1 coding upstream 338365 4105476 ~ 4115227 (+)
CI01000299_04472181_04474247 NA coding downstream 17087 4470956 ~ 4474271 (+)
CI01000299_04480751_04492829 NA coding downstream 26684 4480553 ~ 4493116 (+)
CI01000299_04496757_04504238 NA coding downstream 42517 4496386 ~ 4504483 (+)
CI01000299_04513358_04524537 NA coding downstream 59489 4513358 ~ 4526677 (+)
CI01000299_04532498_04539703 NA coding downstream 78229 4532098 ~ 4539919 (+)
G405876 NA non-coding upstream 4597 4418304 ~ 4448995 (+)
G405912 NA non-coding upstream 38581 4414792 ~ 4415011 (+)
G405910 NA non-coding upstream 50286 4400579 ~ 4403306 (+)
G405909 NA non-coding upstream 58149 4393464 ~ 4395443 (+)
G405908 NA non-coding upstream 62079 4391131 ~ 4391513 (+)
G405932 NA non-coding downstream 1577 4455446 ~ 4455685 (+)
G405938 NA non-coding downstream 22119 4475988 ~ 4550799 (+)
G405865 NA non-coding downstream 196067 4649936 ~ 4665044 (+)
G405881 NA non-coding downstream 204472 4658341 ~ 4663395 (+)
G405842 NA other upstream 133451 4295533 ~ 4320141 (+)
G405609 NA other upstream 1298418 3154597 ~ 3155174 (+)
G403972 NA other upstream 3847242 604870 ~ 606350 (+)
G403609 NA other upstream 4042804 364139 ~ 410788 (+)
CI01000299_04703290_04704365 NA other downstream 248513 4703071 ~ 4704780 (+)
G406096 NA other downstream 470593 4924462 ~ 4927844 (+)
G406244 NA other downstream 917312 5371181 ~ 5373579 (+)
G406161 NA other downstream 1783969 6237838 ~ 6300508 (+)

Expression


Co-expression Network