G405967


Basic Information

Item Value
gene id G405967
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 4671525 ~ 4671895 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU466490
CCGCTGAGGATATGACGATATCTTTGTCCTTTTAACATTTAAGAGGATTTCCCATGACAGTGCTAGTCAATGCATTTGTCAGTTGCGTCTCGTAAGATGTTGTTTAAAGTAAAAACATTGTCCTTGTTTCCTTGTTTCAGTCCATTTCAATATAAAAGTCTTTGCAAACAGTTCAGTCAAATGTACAAAAGCAGTGCTCTAGTTAGTACAGGATTTAATTTCAATGTAAATATAAAGTTGTGAAACTTAATATAGCCCTTAAGCCAAATCTATTAGCTCTGGAACAAGTAATAGATTAATAAGACCAAGGATTGCCTGTTTGATATACCCAAAACGAATTATACCTCATGTTTAAGCACTATCTACATAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU466490 True 371 lncRNA 0.34 1 4671525 4671895

Neighbor

gene id symbol gene type direction distance location
CI01000299_04554181_04557794 NA coding upstream 113685 4554111 ~ 4557840 (+)
CI01000299_04532498_04539703 NA coding upstream 131606 4532098 ~ 4539919 (+)
CI01000299_04513358_04524537 NA coding upstream 144848 4513358 ~ 4526677 (+)
CI01000299_04496757_04504238 NA coding upstream 167042 4496386 ~ 4504483 (+)
CI01000299_04480751_04492829 NA coding upstream 178409 4480553 ~ 4493116 (+)
CI01000299_04703290_04704365 NA coding downstream 31176 4703071 ~ 4704780 (+)
CI01000299_04736806_04740333 CLIC6 coding downstream 64911 4736806 ~ 4740975 (+)
CI01000299_04819297_04829755 NA coding downstream 146790 4818685 ~ 4829987 (+)
CI01000299_04864582_04885052 RUNX1 coding downstream 192297 4864192 ~ 4885385 (+)
CI01000299_04892566_04900169 NA coding downstream 218496 4890391 ~ 4900536 (+)
G405966 NA non-coding upstream 43 4671215 ~ 4671482 (+)
G405865 NA non-coding upstream 6481 4649936 ~ 4665044 (+)
G405881 NA non-coding upstream 8130 4658341 ~ 4663395 (+)
G405938 NA non-coding upstream 120726 4475988 ~ 4550799 (+)
G406023 NA non-coding downstream 19000 4690895 ~ 4766223 (+)
G405994 NA non-coding downstream 146593 4818488 ~ 4933935 (+)
CI01000299_04906697_04907091 NA non-coding downstream 238022 4906697 ~ 4910073 (+)
G405999 NA non-coding downstream 262420 4934315 ~ 4936448 (+)
G405842 NA other upstream 351384 4295533 ~ 4320141 (+)
CI01000299_04131136_04133439 PCNP other upstream 537584 4131060 ~ 4133941 (+)
G405609 NA other upstream 1516351 3154597 ~ 3155174 (+)
G403972 NA other upstream 4065175 604870 ~ 606350 (+)
G406096 NA other downstream 252567 4924462 ~ 4927844 (+)
G406244 NA other downstream 699286 5371181 ~ 5373579 (+)
G406161 NA other downstream 1565943 6237838 ~ 6300508 (+)

Expression


Co-expression Network