G406134


Basic Information

Item Value
gene id G406134
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 5256739 ~ 5257212 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU466701
GATTTATTAAATTGACAGAATGAAATAGTAAATCGTGCGCACAATTTAGCAAATTTAGGGAACGAAATAGTAAATCTTGCGCACGATCTATTAAATCGATGGAACGAAATAGTAAATCTTGCGCACGATCTATTAAATCGATGGAACGAAATAGTAAATTGTGCGCACGATTTAGCAAATCGATGGAACGAAATAGTAAATCTTGCGCCTGATTCTCTGAACGTTCTGAATCAAGTAGTAACATTTAAAAAAAAAATTAGACAAATGTCCAACAAAAACATTTCAGAAAAAACACTCCATAAATAACATTATTCATGAGAGCACTAGATAACTTTGAACAAACGTTACTGGAAGAACGTTTGTTCATAACTTTAAGAGAACCTTGTCAGAACATTAGCTAAAGTTCTGAGAATGTTCCCTGTTAGCTGGGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU466701 True 432 lncRNA 0.34 2 5256739 5257212

Neighbor

gene id symbol gene type direction distance location
CI01000299_05128395_05192154 NA coding upstream 63745 5128348 ~ 5192994 (+)
CI01000299_04906697_04907091 NA coding upstream 346666 4906697 ~ 4910073 (+)
CI01000299_04892566_04900169 NA coding upstream 356203 4890391 ~ 4900536 (+)
CI01000299_04864582_04885052 RUNX1 coding upstream 371354 4864192 ~ 4885385 (+)
CI01000299_04819297_04829755 NA coding upstream 426752 4818685 ~ 4829987 (+)
CI01000299_05331367_05364944 NA coding downstream 73989 5331201 ~ 5364977 (+)
CI01000299_05392812_05418070 GART coding downstream 135480 5392692 ~ 5418352 (+)
CI01000299_05619817_05725510 NA coding downstream 362492 5619704 ~ 5727439 (+)
CI01000299_05732790_05737401 N6AMT1 coding downstream 475578 5732790 ~ 5737802 (+)
CI01000299_05778912_05790662 NA coding downstream 521351 5778563 ~ 5790755 (+)
G406101 NA non-coding upstream 300383 4956150 ~ 4956356 (+)
G405999 NA non-coding upstream 320291 4934315 ~ 4936448 (+)
G405994 NA non-coding upstream 322804 4818488 ~ 4933935 (+)
G406023 NA non-coding upstream 490516 4690895 ~ 4766223 (+)
G406203 NA non-coding downstream 54956 5312168 ~ 5745426 (+)
G405992 NA non-coding downstream 119055 5376267 ~ 5379015 (+)
G405987 NA non-coding downstream 167377 5424589 ~ 5429645 (+)
G406315 NA non-coding downstream 295430 5552642 ~ 5554868 (+)
G406354 NA non-coding downstream 377536 5634748 ~ 5639866 (+)
G406096 NA other upstream 328895 4924462 ~ 4927844 (+)
CI01000299_04703290_04704365 NA other upstream 552114 4703071 ~ 4704780 (+)
CI01000299_04480751_04492829 NA other upstream 750822 4480553 ~ 4493116 (+)
G405842 NA other upstream 936598 4295533 ~ 4320141 (+)
CI01000299_04131136_04133439 PCNP other upstream 1122798 4131060 ~ 4133941 (+)
G406244 NA other downstream 113969 5371181 ~ 5373579 (+)
G406161 NA other downstream 980626 6237838 ~ 6300508 (+)

Expression


Co-expression Network