G406354


Basic Information

Item Value
gene id G406354
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 5634748 ~ 5639866 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU466941
TACTGTCAGGGAATGAACACAGACAGAGGATCCAAGTGCAAGAATAACAATATTTATTGACAGGAAAATGCTGTACAATAACTTCACTCCAAGGGTCAGTCGAGGCAGAGGCTGTGGCGTGCAGAGTGGCGAGGCACTGGGTGGCGCAGGGCTACAGCGGGTATCAGAGAACAAGGATAATCCAACCCAGAAAACAGGGCACACGACGAAAGTCCAGAAACCAAAAGCCAGGAAGAAACACACAGAGAACACGACACCGGGAACAGCCTGCAACGAACTGACAAAGACACATAAAGACATGCACAATATATAACAACCACTAACAAGACACGGCTGGCAACAGATCGCAATCAGACCATAATGGGTGACGCCCACACAATCATTCACTCACACCCAACACACACACACACACACACACACACACACACACAACAACACACGAGGGTGAGTAAGTGAATCCATGAACCGTGACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU466941 True 473 lncRNA 0.48 2 5634748 5639866

Neighbor

gene id symbol gene type direction distance location
CI01000299_05392812_05418070 GART coding upstream 216396 5392692 ~ 5418352 (+)
CI01000299_05331367_05364944 NA coding upstream 269771 5331201 ~ 5364977 (+)
CI01000299_05254419_05314859 NA coding upstream 318505 5254419 ~ 5316243 (+)
CI01000299_05128395_05192154 NA coding upstream 441754 5128348 ~ 5192994 (+)
CI01000299_04906697_04907091 NA coding upstream 724675 4906697 ~ 4910073 (+)
CI01000299_05732790_05737401 N6AMT1 coding downstream 92924 5732790 ~ 5737802 (+)
CI01000299_05778912_05790662 NA coding downstream 138697 5778563 ~ 5790755 (+)
CI01000299_05799020_05801977 NA coding downstream 159076 5798942 ~ 5802114 (+)
CI01000299_05816534_05817445 NA coding downstream 176668 5816534 ~ 5817456 (+)
CI01000299_05836707_05843149 NA coding downstream 196435 5836301 ~ 5843594 (+)
G406315 NA non-coding upstream 79880 5552642 ~ 5554868 (+)
G405987 NA non-coding upstream 205103 5424589 ~ 5429645 (+)
G405992 NA non-coding upstream 255733 5376267 ~ 5379015 (+)
G406134 NA non-coding upstream 377536 5256739 ~ 5257212 (+)
G406101 NA non-coding upstream 678392 4956150 ~ 4956356 (+)
G406189 NA non-coding downstream 116911 5756777 ~ 5827969 (+)
G406164 NA non-coding downstream 119358 5759224 ~ 5762316 (+)
G406210 NA non-coding downstream 190218 5830084 ~ 5831741 (+)
G406417 NA non-coding downstream 259791 5899657 ~ 5899988 (+)
G406168 NA non-coding downstream 288316 5928182 ~ 5929929 (+)
G406244 NA other upstream 261169 5371181 ~ 5373579 (+)
G406096 NA other upstream 706904 4924462 ~ 4927844 (+)
CI01000299_04703290_04704365 NA other upstream 930123 4703071 ~ 4704780 (+)
CI01000299_04480751_04492829 NA other upstream 1128831 4480553 ~ 4493116 (+)
G405842 NA other upstream 1314607 4295533 ~ 4320141 (+)
G406161 NA other downstream 597972 6237838 ~ 6300508 (+)

Expression


Co-expression Network