G406196


Basic Information

Item Value
gene id G406196
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 6265754 ~ 6266230 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU466767
GACGTACGTCCGGTCCAGGAAGAGGAAAATACTGCGGATCATGATCTGAGGGGGACGAGACGGAACATGTGTAAAGACACACACACACACACACACACACACACACACACACACACACACAGGTCTGTGTCGTACCGTCTGTCTGCAGTGGTCCTGCCAGCATCGGTTCATCCTCTTCAGGAAGGACAGGCTGTCCAGCGACTCTTCTCTGAACTGATGGATCTGAGCCCGAACGTGATCTTCACACACTTGACGCAGCTGCTTGTACAGCATGGGCGACACTTTATACGAGCAGAGATTCTCCACGGCCTGCGGGAGACGAAAACACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU466767 True 329 lncRNA 0.53 2 6265754 6266230

Neighbor

gene id symbol gene type direction distance location
CI01000299_06233485_06239858 NA coding upstream 25852 6232572 ~ 6239902 (+)
CI01000299_06223295_06227054 ADPRHL1 coding upstream 38568 6222892 ~ 6227186 (+)
CI01000299_06217616_06220842 DCNL2, DCUN1D2, DCUN1D2A coding upstream 44683 6217616 ~ 6221071 (+)
CI01000299_06177821_06180061 NA coding upstream 85563 6177821 ~ 6180191 (+)
CI01000299_06116505_06128180 GAS6 coding upstream 137304 6115638 ~ 6128450 (+)
CI01000299_06269853_06274289 PCID2 coding downstream 3372 6269602 ~ 6274393 (+)
CI01000299_06312445_06318421 NA coding downstream 45810 6312040 ~ 6318421 (+)
CI01000299_06322253_06326504 CREG1 coding downstream 56023 6322253 ~ 6326562 (+)
CI01000299_06396938_06400105 NA coding downstream 130708 6396938 ~ 6401342 (+)
CI01000299_06416707_06422267 NA coding downstream 150477 6416707 ~ 6422648 (+)
G406478 NA non-coding upstream 58710 6206834 ~ 6207044 (+)
G406162 NA non-coding upstream 68080 6189779 ~ 6197674 (+)
G406470 NA non-coding upstream 82223 6183194 ~ 6183531 (+)
G406461 NA non-coding upstream 114632 6149599 ~ 6151122 (+)
G406463 NA non-coding upstream 129633 6135889 ~ 6136121 (+)
G406142 NA non-coding downstream 13189 6279419 ~ 6286426 (+)
G406172 NA non-coding downstream 44178 6310408 ~ 6311699 (+)
G406480 NA non-coding downstream 56955 6323185 ~ 6323623 (+)
G406494 NA non-coding downstream 125850 6392080 ~ 6392356 (+)
CI01000299_06541306_06541820 NA non-coding downstream 275032 6541262 ~ 6541985 (+)
G406244 NA other upstream 892175 5371181 ~ 5373579 (+)
G406096 NA other upstream 1337910 4924462 ~ 4927844 (+)
CI01000299_04703290_04704365 NA other upstream 1561129 4703071 ~ 4704780 (+)
CI01000299_04480751_04492829 NA other upstream 1759837 4480553 ~ 4493116 (+)
G405842 NA other upstream 1945613 4295533 ~ 4320141 (+)

Expression


Co-expression Network