CI01000304_00962923_00975418


Basic Information

Item Value
gene id CI01000304_00962923_00975418
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 962753 ~ 975644 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_00962923_00975418.mRNA
GAATAAAAGTCACCAATTACGTATCTTTTTCAATTATTGTTTAAAGGACATGACCGCATAGAGCAACGCAAGCGTGTATTTACAACACTGTTTTGTAACATGAATCATATTTTTAAGCTTTTTGCAAACGGGAAGGGACCCCATTTCCAAATGTTGTGATTTTTACCATAATGTTTCGGAGTAATAGTGCCCGTAATAAAGGAAGCTGTAACATATGTATGATAAATAGCAATTACTATGCCTTTGTAAAGGAAGAAGGAGTCCTGGATTTCCTCGATCCACCCGACCCCACCCACCTCAAGGAGACTCTCAGGATGACTGTGTTGCGTCTACCTGAAGGGGAGTATTGGCATGATCTTCTTGGTTGGTGTATCCTGACATTTGTCCCACACATCATGCCAAACAAGACCACAGACCCACATCAAACCGTGACAACAGCAGGAACTGAAATCAAGCATGTCTGGTCTTGTCAAGCGTGCCATGCTCATCTCAGCGATGTGTCGTCACATCCAAAGAGAATGTCTGAACGGAGCGGAGAAAACACAGATCTAAAGGCCATCATGTCTGAGAAAAAAGCAAGTAAAGAAGGAAAAAATGGTGAAAAGAAAAAGGATAAGGACTCTGAGAGATCAAACAAGTCCGACAACTCCCCGCAAGCGGAACCCAAGTTAAAGAATCTGCGGAGCATGACAGTGGAGGATGGGAAGAAGACTGTACTCAAGTGTGAGATTGTGGCGGGAAACCCAGCGCCCAGCATCAAGTGGTACAAGAACGGGAAAGAACTCACAGGCAAAAGCAAACCCCAAAGCATAAAGATTAAAAAAAAGAAAAGGGGGAAAATATCTGAGCTATTGATCAGGAAGTCCACAGAGGCAGATGCTGGTTTATACACCTGTGAGGCAGTCAACAACCTTGGAAAAACAAATACTACAGCAAGCCTAATCATCACCAAAAGCATTAGAACAGCAATGACCAGCCAGTCTGTTAATGTTAATTACTTTAAACGCCCTGATATTGATGCCTTACAAACCTAGTAAAAAATGAAGAGCACAGACAGAGCACAGATTACTGCTGTGGCAAAACCCTTAGTAGAATGCTTTCATAAAGGATTGCTCATTGAAGCGCATGATTTTAGGATGTTAAACTAATTTTATGTAGTTTAACATGCTGCGCTCATTATGATGTCATACGTCTGCCACTGCTACCATATACAGCAGAGACCAGGAGCAGGAGCTGTGCTGTTTCTCTGTGAAATGCAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_00962923_00975418.mRNA True 1260 mRNA 0.42 7 962753 975644

Neighbor

gene id symbol gene type direction distance location
CI01000304_00933179_00942864 NA coding upstream 18888 931798 ~ 943865 (+)
CI01000304_00884782_00917034 WRN coding upstream 45719 884490 ~ 917034 (+)
CI01000304_00846138_00850133 NA coding upstream 112374 846059 ~ 850379 (+)
CI01000304_00772995_00827316 CHSY3 coding upstream 135145 771033 ~ 827608 (+)
CI01000304_00757894_00760456 NA coding upstream 202093 757894 ~ 760660 (+)
CI01000304_00983004_01018406 NRG1 coding downstream 7268 982912 ~ 1018693 (+)
CI01000304_01173248_01184405 SH2D4A coding downstream 196493 1172137 ~ 1184529 (+)
CI01000304_01269500_01313976 PPIP5K2 coding downstream 292379 1268023 ~ 1314632 (+)
CI01000304_01323957_01324596 C16H5ORF30, CUNH5ORF30 coding downstream 348313 1323957 ~ 1326322 (+)
CI01000304_01337171_01361506 CHD1 coding downstream 361527 1337171 ~ 1361506 (+)
G418180 NA non-coding upstream 35981 926505 ~ 926772 (+)
G418156 NA non-coding upstream 269150 693350 ~ 693603 (+)
G418149 NA non-coding upstream 295270 666617 ~ 667483 (+)
G418148 NA non-coding upstream 298136 664260 ~ 664617 (+)
G418145 NA non-coding upstream 308850 653652 ~ 653903 (+)
G418192 NA non-coding downstream 69272 1044916 ~ 1045411 (+)
G418195 NA non-coding downstream 71754 1047398 ~ 1047599 (+)
G418196 NA non-coding downstream 72614 1048258 ~ 1048495 (+)
G418197 NA non-coding downstream 73975 1049619 ~ 1049865 (+)
G418198 NA non-coding downstream 75422 1051066 ~ 1051348 (+)
G418116 NA other upstream 87504 872670 ~ 875249 (+)
G418059 NA other upstream 398302 558092 ~ 564451 (+)
G417987 NA other upstream 734900 226703 ~ 227853 (+)
G418981 NA other downstream 1116850 2092494 ~ 2093678 (+)
G420445 NA other downstream 3327692 4303336 ~ 4303832 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other downstream 4197579 5173426 ~ 5176791 (+)
G421162 NA other downstream 5265589 6241233 ~ 6242997 (+)
CI01000304_07352697_07354032 NA other downstream 6377005 7352621 ~ 7354396 (+)

Expression


Co-expression Network