G418649


Basic Information

Item Value
gene id G418649
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 1206710 ~ 1206976 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU480882
CTTATTTTTGATTTTAATGTTTGTATCTCCCTGGTCATGTTGCCTGTTTGGGGGTATAAATTAAGTGAAAACAGAATGCTTGTTTAGCAATGCATGTTACAACATTTTAGCCACATTTCTAAAACCATTTATTCTCTCAACTTAAACTAAACATTCTTTGTAAAATTCTGTTAAACAGTAAGTATAATGCCTATTTATGAATATATTGTATAATGCTGTATAATATTTAATACGCAAATTTCTAGCGTCTATAAATTATCAATATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU480882 True 267 lncRNA 0.27 1 1206710 1206976

Neighbor

gene id symbol gene type direction distance location
CI01000304_01173248_01184405 SH2D4A coding upstream 22181 1172137 ~ 1184529 (+)
CI01000304_00983004_01018406 NRG1 coding upstream 188017 982912 ~ 1018693 (+)
CI01000304_00962923_00975418 NA coding upstream 231066 962753 ~ 975644 (+)
CI01000304_00933179_00942864 NA coding upstream 262845 931798 ~ 943865 (+)
CI01000304_00884782_00917034 WRN coding upstream 289676 884490 ~ 917034 (+)
CI01000304_01269500_01313976 PPIP5K2 coding downstream 61047 1268023 ~ 1314632 (+)
CI01000304_01323957_01324596 C16H5ORF30, CUNH5ORF30 coding downstream 116981 1323957 ~ 1326322 (+)
CI01000304_01337171_01361506 CHD1 coding downstream 130195 1337171 ~ 1361506 (+)
CI01000304_01366207_01367994 DCP2 coding downstream 159144 1366120 ~ 1368002 (+)
CI01000304_01369056_01372878 DCP2 coding downstream 161620 1368596 ~ 1372972 (+)
G418113 NA non-coding upstream 300 1205591 ~ 1206410 (+)
G418261 NA non-coding upstream 26693 1179814 ~ 1180017 (+)
G418257 NA non-coding upstream 40112 1166295 ~ 1166598 (+)
G418256 NA non-coding upstream 40517 1165944 ~ 1166193 (+)
G418253 NA non-coding upstream 43579 1162022 ~ 1163131 (+)
G418691 NA non-coding downstream 125358 1332334 ~ 1332597 (+)
G418667 NA non-coding downstream 158038 1365014 ~ 1365559 (+)
G418694 NA non-coding downstream 168985 1375961 ~ 1376294 (+)
G418701 NA non-coding downstream 175371 1382347 ~ 1382859 (+)
G418702 NA non-coding downstream 176038 1383014 ~ 1383342 (+)
G418116 NA other upstream 331461 872670 ~ 875249 (+)
G418059 NA other upstream 642259 558092 ~ 564451 (+)
G417987 NA other upstream 978857 226703 ~ 227853 (+)
G418981 NA other downstream 885518 2092494 ~ 2093678 (+)
G420445 NA other downstream 3096360 4303336 ~ 4303832 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other downstream 3966247 5173426 ~ 5176791 (+)
G421162 NA other downstream 5034257 6241233 ~ 6242997 (+)
CI01000304_07352697_07354032 NA other downstream 6145673 7352621 ~ 7354396 (+)

Expression


Co-expression Network