XLOC_012746 (pllp)


Basic Information

Item Value
gene id XLOC_012746
gene name pllp
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 18861359 ~ 18870632 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00025450
GACAAATACAGTTTTACTACTGCTCGAGTCATTGATCGCAATGCAAAAATGACTGTTGTGCAGTGACATTTTCATAAAATCAACTTATTTTATACTGAGAAGAAATGGCGGATTTTCCTGGGAAGGTCAGCACTCAGACCAGCTCACAAGAGCCTCAGAGAAGTTTTGCAATCTCATCAAGTGTTGACATGGGTTTTATCAAGAGCATTCCTGGAATACTGCTTATAGCCGAGATCGTTGTTGGATTATTAGTGTGGACGCTGATTGCCAGTACTCCCCATTACTTGATACCTGCTTTAGGCTGGGTGTTGTTTGTGAGCATTACTCTGTGGCTTCTGAGCATTGCCCTGCTGGTTATCCTGTTGCTGAGTCTTCATCAGCGGTTACCCTCGGTGCCCTGGCCTTTGGTGCTGTTGGTATTCTATTCTGTCGCAGCTCTTTTGTATCTCACTGCCTTTCTGGCTAATGCTGCAACTGTTCCTGGTGGGTATTACCAGGGTCATCTAGGAGCCTCTGCGTTCTTTGGTATAGTGGAGACCCTGTTATACACAGCCAGCAGCTACTTTGCCTATTTGGGCTGGAGGGGTGAAGGGCAGAACGCAGCAGGGAGCACGGTGCCCGTGTAGAGCATCTCATCGTCTGGATAACACTCACATTCTCTGTATGAGAACACTTGGAAGAGGATTATTACTCAGGTTATTGCTGAAACTCATCTTCGGTGATGTCTGACAGTCTTAATGGTGCAAAGCGTAATTGCTATGGTTTATAACATG
>TCONS_00025451
GCAGTGACAGCACCTGCATGACCTGTTCCTGTTCTTGTGTCTCCACTTTCATTTTCTAGTGACATTTTCATAAAATCAACTTATTTTATACTGAGAAGAAATGGCGGATTTTCCTGGGAAGGTCAGCACTCAGACCAGCTCACAAGAGCCTCAGAGAAGTTTTGCAATCTCATCAAGTGTTGACATGGGTTTTATCAAGAGCATTCCTGGAATACTGCTTATAGCCGAGATCGTTGTTGGATTATTAGTGTGGACGCTGATTGCCAGTACTCCCCATTACTTGATACCTGCTTTAGGCTGGGTGTTGTTTGTGAGCATTACTCTGTGGCTTCTGAGCATTGCCCTGCTGGTTATCCTGTTGCTGAGTCTTCATCAGCGGTTACCCTCGGTGCCCTGGCCTTTGGTGCTGTTGGTATTCTATTCTGTCGCAGCTCTTTTGTATCTCACTGCCTTTCTGGCTAATGCTGCAACTGTTCCTGGTGGGTATTACCAGGGTCATCTAGGAGCCTCTGCGTTCTTTGGTATAGTGGAGACCCTGTTATACACAGCCAGCAGCTACTTTGCCTATTTGGGCTGGAGGGGTGAAGGGCAGAACGCAGCAGGGAGCACGGTGCCCGTGTAGAGCATCTCATCGTCTGGATAACACTCACATTCTCTGTATGAGAACACTTGGAAGAGGATTATTACTCAGGTTATTGCTGAAACTCATCTTCGGTGATGTCTGACAGTCTTAATGGTGCAAAGCGTAATTGCTATGGTTTATAACATGGACACTGTGTACTGAGAGTCACCATCCTGCATATGCAGGGctcagattttatttttacatttttgtttttgttttttttaagaaagaaatGAATTGTTCTATGCAAAAGGGATGCATTTGTTTAATCAGGAGTGACAGTGatattctattttaaataaatgcgtCCTTGGTGAAatgaaaagcattttaaaaagcccaagtttttaaacaatatactgtttttttatacACACTGAACGACTTGAGAAAACATGTATTTAAGAGGTAAAGTTGTTGTCTTGGTGTAAATCTGCACTTGATGTATTTGATTGGAGCATAAACATATTTGGATAAAATACGATTAAAGAA

Function

symbol description
pllp Predicted to be a structural constituent of myelin sheath. Acts upstream of or within digestive tract morphogenesis and regulation of endocytosis. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in hatching gland; mid intestine; and pronephric duct. Orthologous to human PLLP (plasmolipin).

GO:

id name namespace
GO:0030100 regulation of endocytosis biological_process
GO:0048546 digestive tract morphogenesis biological_process
GO:0042552 myelination biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0019911 structural constituent of myelin sheath molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050419-195 Predicted to be a structural constituent of myelin sheath. Acts upstream of or within digestive tract morphogenesis and regulation of endocytosis. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in hatching gland; mid intestine; and pronephric duct. Orthologous to human PLLP (plasmolipin).

Ensembl:

ensembl_id ENSDARG00000062756

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00025450 False 773 mRNA 0.46 5 18861359 18870284
TCONS_00025451 True 1117 mRNA 0.41 4 18863167 18870632

Neighbor

gene id symbol gene type direction distance location
XLOC_012745 NA coding upstream 32874 18827219 ~ 18828485 (+)
XLOC_012743 NA coding upstream 48451 18740827 ~ 18812908 (+)
XLOC_012744 NA coding upstream 61307 18798840 ~ 18800052 (+)
XLOC_012742 NA coding upstream 90465 18733147 ~ 18770894 (+)
XLOC_012741 BX649641.6 coding upstream 135266 18725978 ~ 18726093 (+)
XLOC_012747 arih1 coding downstream 9101 18879733 ~ 18901017 (+)
XLOC_012748 BX571681.4 coding downstream 39734 18910366 ~ 18911615 (+)
XLOC_012749 NA coding downstream 98258 18968890 ~ 18969766 (+)
XLOC_012750 hacd3 coding downstream 111445 18982077 ~ 18995283 (+)
XLOC_012751 slc24a1 coding downstream 135431 19006063 ~ 19039960 (+)
XLOC_012752 BX548060.1 non-coding downstream 155357 19025989 ~ 19033213 (+)
XLOC_012756 NA non-coding downstream 542465 19413097 ~ 19416040 (+)
XLOC_012759 NA non-coding downstream 654209 19524841 ~ 19620953 (+)

Expression


Co-expression Network