CI01000306_01871685_01875161


Basic Information

Item Value
gene id CI01000306_01871685_01875161
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 1871570 ~ 1875301 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_01871685_01875161.mRNA
CCATAAAAAACCCATTACAGGACTTCTTGCTTTCACTTTCAGTTGTTGTGTCCTATATAAGGAGACTCCACCAAAGCCCTGCTGAGATTTTGTGAGAACTTGTGACACCCAAAAAATGTCAGACCGACAATTGAGCTACCATGAACATGAAGATGAAGAAGAATATGATAAAGAATGTGATGTTCCTCATACCAAACAGCCAAGTGAAGAAAACCCAAAAAATACAAGTGTGCAACTTGCATCACTTAATGCTGATGTAATCAAAACAAGTCTACGTATGATTGACACATTTAACAGACCAGGAGATGCCTATACAGAAAGCAAGTATGCTCGAGCTGGAACATATAAGATAGATCCTGAAAACCAACCAGGAATGAGGATTCCCAAGGCTGGAGCTTATGCAGAAGCAGGAGTTGGACGAGCTCGTGCTCAATACAAAGTATTCCAGGCTGAAGCCAAAGGTCCCAACGCCGCAGCTGGAGCTGAAGCCAGTCTGGGACTCGGAGCAATGGCTCGAGCTGAAGTTGTCAGCGCATCGGCTAAAGCCAGTCCAGTTGGTGTGAAATTGGGACTTGGAGTTGATACGGGTGCATCTATTGGTCTGGGTGGCATGGAGTTAAAAGTCTTGGGAACTGGAGTCTCAAATGGTCCAGAAATTGGTGTAGCTGTTCTGGGTAACGAAGTAAAAGTGTCATGTGCAATCATGTAGTCATACAGGTATTAATTACTTTTGAATATTTGTTATATGTGAAACCATGAAGACAAAAACCTGAATTTTTTAAAACTTTAACAATATAGTGACATGTTTTATTTTATAATTCTACAACTGTTGAGACTTTTCATTTGAAA

Function

NR:

description
reproduction regulator 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_01871685_01875161.mRNA True 849 mRNA 0.41 2 1871570 1875301

Neighbor

gene id symbol gene type direction distance location
CI01000306_01856805_01857982 NA coding upstream 13407 1856713 ~ 1858163 (+)
CI01000306_01854835_01855388 NA coding upstream 16010 1854835 ~ 1855560 (+)
CI01000306_01811531_01821737 NA coding upstream 49706 1811531 ~ 1821864 (+)
CI01000306_01679537_01704400 NA coding upstream 166619 1679537 ~ 1704951 (+)
CI01000306_01639496_01661857 ANKRD13C.S, ANKRD13C, ANKRD13C.L coding upstream 208422 1639065 ~ 1663148 (+)
CI01000306_01880262_01881242 NA coding downstream 4887 1880188 ~ 1881438 (+)
CI01000306_01885017_01886202 NA coding downstream 9617 1884918 ~ 1886594 (+)
CI01000306_01887307_01897613 NA coding downstream 11767 1887068 ~ 1897981 (+)
CI01000306_01907357_01910697 NA coding downstream 31970 1907271 ~ 1911561 (+)
CI01000306_02082508_02100892 DENND6AA, DENND6A coding downstream 207207 2082508 ~ 2100892 (+)
G430145 NA non-coding upstream 6037 1846063 ~ 1865533 (+)
G430585 NA non-coding upstream 61035 1810079 ~ 1810535 (+)
G430569 NA non-coding upstream 107084 1764254 ~ 1764486 (+)
G430153 NA non-coding upstream 157320 1712697 ~ 1714250 (+)
G430082 NA non-coding upstream 165498 1705371 ~ 1706072 (+)
G430598 NA non-coding downstream 3080 1878381 ~ 1883427 (+)
G430603 NA non-coding downstream 23564 1898865 ~ 1899107 (+)
G430605 NA non-coding downstream 27818 1903119 ~ 1904347 (+)
G430599 NA non-coding downstream 30176 1905477 ~ 1906644 (+)
G430611 NA non-coding downstream 60284 1935585 ~ 1989749 (+)
CI01000306_01209847_01210850 ACYP2 other upstream 653013 1209395 ~ 1211232 (+)
G430452 NA other upstream 720632 1150597 ~ 1150938 (+)
G430409 NA other upstream 871668 925544 ~ 999902 (+)
CI01000306_00235686_00242814 NA other upstream 1634201 235447 ~ 242861 (+)
G430719 NA other downstream 273081 2148382 ~ 2150954 (+)
CI01000306_02974291_02976718 TP53INP2 other downstream 1097855 2973156 ~ 2979157 (+)
CI01000306_03772689_03777211 DYNLRB1 other downstream 1898843 3772689 ~ 3777550 (+)
CI01000306_03778075_03781910 MAP1LC3A, MAP1LC3A.L other downstream 1902751 3778052 ~ 3783019 (+)
CI01000306_03807268_03810946 NA other downstream 1932932 3807268 ~ 3811243 (+)

Expression


Co-expression Network