CI01000306_02369579_02380912 (REM1, GEM)


Basic Information

Item Value
gene id CI01000306_02369579_02380912
gene name REM1, GEM
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 2369579 ~ 2381322 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_02369579_02380912.mRNA
ATGGAGATGGAGTGGGACGGTGCTAAAAAGGCACATTATAACATTTCGTGGCCCTGGATGATGTTGAAAGACGCTCAGCGAGGACCCACGAGACTTACAGTCGAGGGCCCATTTGTTGAGCTATGTTTATGGATCATGCATACCTATGTTTATAAGATGACACTCAACACACAGAAAGAGGGAAAGGAACCACTGAGGAGAAGAGCGAGCACTCCCATCCCCTCCTCTCGTCAAGCAGGCCGGGGAAATAGAGACCCCTCGGCTGACCCGTATCACCCTCCTCTCGCCCAGTCAGCCTCTTACCACCCTGGAGACAAGAGCATCCACTCACGGGCCAACTGGTCTTCAGACTCCGAGTCGGACAGCTCTGGATCCGAGTGTCTTTATCGTGTGGTTTTGTTGGGGGATCACGGCGTGGGGAAGTCAAGCCTTGCCAACATTTTTGCTGGAATACAAGAGAAGGATGCCCACAAACACATTGGAGAGGATACATATGAGAGAACCCTTACGGTGGATGGGGAGGAGACGACCCTAGTTGTGATGGATACGTGGGAAACAGAAAAACAGGTATGCAAACATAATGCATCAATATGTCTCAACACAATCGACCTCATTAACCTACTTGATGAATTACCAGATGTAAATAAAGGAAAATCTGGAGGCATTTCATCTTCAGGCGGTTGCATGTGTCTGTCAGCCGTGAGTCTTTGCTTTGTAGACACAAGTCTCACCTACAGGGCCATAATGCCCTTTGTGCAATGCTGTGAAAAAAGCATGGCCACTCGCTGCCAGTGGCTAAACTCCATTGAGCGATGCCCTGCAGAGGAAGATGAGAAGTGGGTTCAGGATTACTGCATGCAGGTGGGGAATGCTTACGTTATTGTTTACTCCATCACTGACCGCAGCAGCTTTGAGAGCGCATCGGAGTTACGAATCCAGCTGCGGCGCATCCGGCAGGCTGAAAATATTCCCATCATCCTTGTGGGCAACAAAAGTGACTTAGTGCGCTCTCGAGAGGTGGCAGTGGAAGAGGGTCGGGCTTGTGCCGTGGTGTTTGACTGCAAGTTCATAGAAACCTCCGCCTCCCTCCACCACAATGTTCATGAGCTCTTTGAGGGCATTGTGAGGCAGATCCGACTGCGGCGAGACAGCAAAGAGATCAATGAGCGCCGCCGCTCTGTCTACAAACGAAAAGAAAGCATCACCAAGAAGGCCAGACGCTTCCTGGATCGACTGGTGGCCAAGAACAACAAGAAGATGGCCATGAAAGTGCGCTCCAAGTCCTGCCATGACCTCGCAGTGCTTTGAACCCAAAGATCGCTCTCATTCCTTGAACTCTGGGTTTCTTTGTTTTCTGTTCGAAAAGAGGATTTGACTTTCTGACAAATCCACTTTTGAAGGTGAACATTAATTCAAATGTTTGTTTTTGTTTGTTTGTTTATTCATTCCAATCGAATTATTGTATTGAAAAGCTTTTTACTGATTACCCTGAAGACATTGAGGTTGTGCTCATTGTTCTGTCCTATAGATCAAATTTTTGATAGTCGTTTGAATTAAACCAAAGGTTTATTACTGTATATCACCAATTAAGTGGTCTTTGTTTTTTTTTATGAACATTTTATCAATGTTTGCCTTATCAGACTGAATAGACATTAGAAATAATTAACAAGCAATATTTATTATTCATTGTTGTTCATGTTTTTGGTTTTTTTTTTCTA

Function

symbol description
rem1 Enables calcium channel regulator activity. Predicted to act upstream of or within negative regulation of high voltage-gated calcium channel activity and signal transduction. Predicted to be located in membrane. Predicted to be active in plasma membrane. Is expressed in nervous system; neural tube; segmental plate; and somite. Orthologous to human REM1 (RRAD and GEM like GTPase 1).
gem Enables calcium channel regulator activity. Predicted to act upstream of or within negative regulation of high voltage-gated calcium channel activity and signal transduction. Predicted to be located in membrane. Predicted to be active in plasma membrane. Orthologous to human GEM (GTP binding protein overexpressed in skeletal muscle).

NR:

description
Rem1

GO:

id name namespace
GO:0016020 membrane cellular_component

KEGG:

id description
K07846 GEM; GTP binding protein overexpressed in skeletal muscle

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_02369579_02380912.mRNA True 1718 mRNA 0.46 5 2369579 2381322

Neighbor

gene id symbol gene type direction distance location
CI01000306_02359989_02366944 NA coding upstream 2582 2359989 ~ 2366997 (+)
CI01000306_02354432_02358965 PNP4A coding upstream 10078 2353181 ~ 2359501 (+)
CI01000306_02263738_02279937 NA coding upstream 89567 2263618 ~ 2280012 (+)
CI01000306_02238316_02241601 MAF1 coding upstream 127179 2238316 ~ 2242400 (+)
CI01000306_02230144_02236022 ZC3H11A coding upstream 132597 2230144 ~ 2236982 (+)
CI01000306_02389329_02392416 RBM39, RBM39A, RBM39B coding downstream 8007 2389329 ~ 2392960 (+)
CI01000306_02398383_02404841 NFS1 coding downstream 16545 2397867 ~ 2404903 (+)
CI01000306_02552479_02576156 NA coding downstream 170778 2552100 ~ 2576536 (+)
CI01000306_02591160_02596388 SYT6 coding downstream 209838 2591160 ~ 2597618 (+)
CI01000306_02614704_02617766 NA coding downstream 233210 2614532 ~ 2618085 (+)
G430805 NA non-coding upstream 16640 2352711 ~ 2352939 (+)
G430745 NA non-coding upstream 84293 2270777 ~ 2285286 (+)
G430739 NA non-coding upstream 177198 2159462 ~ 2192381 (+)
CI01000306_02112910_02114040 ARF4B non-coding upstream 255477 2112815 ~ 2114420 (+)
G430632 NA non-coding upstream 340287 2003702 ~ 2029292 (+)
G430811 NA non-coding downstream 4962 2386284 ~ 2386558 (+)
G430834 NA non-coding downstream 100784 2482106 ~ 2483041 (+)
G430931 NA non-coding downstream 502569 2883891 ~ 3238771 (+)
G430690 NA non-coding downstream 654746 3036068 ~ 3054700 (+)
G430951 NA non-coding downstream 668575 3049897 ~ 3050294 (+)
G430719 NA other upstream 218625 2148382 ~ 2150954 (+)
CI01000306_01209847_01210850 ACYP2 other upstream 1151022 1209395 ~ 1211232 (+)
G430452 NA other upstream 1218641 1150597 ~ 1150938 (+)
G430409 NA other upstream 1369677 925544 ~ 999902 (+)
CI01000306_00235686_00242814 NA other upstream 2132210 235447 ~ 242861 (+)
CI01000306_02974291_02976718 TP53INP2 other downstream 591834 2973156 ~ 2979157 (+)
CI01000306_03772689_03777211 DYNLRB1 other downstream 1392822 3772689 ~ 3777550 (+)
CI01000306_03778075_03781910 MAP1LC3A, MAP1LC3A.L other downstream 1396730 3778052 ~ 3783019 (+)
CI01000306_03807268_03810946 NA other downstream 1426911 3807268 ~ 3811243 (+)
G432583 NA other downstream 1945080 4326402 ~ 4327822 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_003445 rem1 coding NC_007122.7 CM002895.2 24313931 ~ 24332052 (+)
bowfin (Amia calva) AMCG00007999 rem1,gem,LOC108411381,LOC107727768,LOC107655086,LOC107727184,LOC107554936 coding CM030123.1 CM030123.1 39269967 ~ 39289998 (-)