XLOC_012752 (BX548060.1)


Basic Information

Item Value
gene id XLOC_012752
gene name BX548060.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 19025989 ~ 19033213 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00025458
gaaacatagtatctacttccagatatggatggccttaatgtgtgcgtcaaagaaagccttgtatttgtatccagatatggatggcgacctgatgcctagaggtgaggtcgccctaagttattaggagctgatctccaacctgtaaaaagctaaaccaagaacacaatagacacaaaagaccatctgtgttaaagactccaaggatgtttcttgtacgttcagctgtgttatcaggctggttcaagactgtttccatcaacagtctgctgcaatatcttggctacacacagtctgtctccacacaaaaaggaattacattactattaattatactcaaaaacagatcaatcaaacagctataaaattataggcaatatatcaggacaataaaacaggtgtcttcttctcctctgtattggacctcTAGACATAggaacagatagagagagagagagagagagagagagagagagagagaggtctccatgacctatgacctggtctgtgtgtctcctgaaaacaaagttaaaatagacaggcaaaaagagaaacaaggacacagaacattcttacagtaagcagttttaacttattcattagttaaaatcaattcacagttaaatactgagaaacaggatgatgaaaaggataaacggtggtccatgatgagatgaattggaaagcagaaatccgaatccttcagtaTACACTAGA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000096256

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00025458 True 714 lncRNA 0.39 2 19025989 19033213

Neighbor

gene id symbol gene type direction distance location
XLOC_012750 hacd3 coding upstream 30706 18982077 ~ 18995283 (+)
XLOC_012749 NA coding upstream 56223 18968890 ~ 18969766 (+)
XLOC_012748 BX571681.4 coding upstream 114374 18910366 ~ 18911615 (+)
XLOC_012747 arih1 coding upstream 124972 18879733 ~ 18901017 (+)
XLOC_012746 pllp coding upstream 155357 18861359 ~ 18870632 (+)
XLOC_012753 si:dkey-242h9.5 coding downstream 68466 19101679 ~ 19103964 (+)
XLOC_012754 si:dkey-242h9.3 coding downstream 87771 19120984 ~ 19124312 (+)
XLOC_012755 rab11a coding downstream 98560 19131773 ~ 19139152 (+)
XLOC_012756 NA coding downstream 379884 19413097 ~ 19416040 (+)
XLOC_012757 map2k1 coding downstream 385907 19419120 ~ 19451165 (+)
XLOC_012745 NA non-coding upstream 197504 18827219 ~ 18828485 (+)
XLOC_012743 NA non-coding upstream 213081 18740827 ~ 18812908 (+)
XLOC_012759 NA non-coding downstream 491628 19524841 ~ 19620953 (+)
XLOC_012769 BX890624.2 non-coding downstream 1056168 20089381 ~ 20208129 (+)
XLOC_012771 NA non-coding downstream 1283230 20316443 ~ 20325221 (+)
XLOC_012772 NA non-coding downstream 1294906 20328119 ~ 20376935 (+)
XLOC_012744 NA non-coding upstream 225937 18798840 ~ 18800052 (+)

Expression


Co-expression Network