XLOC_012764 (skor1b)


Basic Information

Item Value
gene id XLOC_012764
gene name skor1b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 19972853 ~ 19982654 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00025472
gttatttgttgctttatttatttatttatttattgtactaACTGCAGCTTAGAATATacttattctgttttttttttttcatcaagatCTACTGATACATTGTTGGATGTTCTTTGTTCTAGAACGTGCTCTCTAATTTCTTAAGGATCGACAAAAGAGCTAAATTAAATATCATGTGAGGTGTCGGATTCCCGTATCTGCTCCGAATCTAAGCATGATGGATTTCCAGGAATGGAATCTATCCCAAATCAGCTGCCGGCTGGAAGAGACTCCAGCTGTTCGCCGAACTCTAAAGACTTGCAGTCTTACTCTGGCCCACCACTTAAGCCGAACCAAGTCAGTGAGACCTCTTTATACGGAATACCGATCGTTTCATTAGTCATAGACGGTCAAGAGAGACTTTGCCTAGCCCAAATATCCAACACTTTGTTGAAGAACTATAGCTATAACGAAATCCACAACCGGCGCGTGGCTCTGGGCATCACCTGTGTGCAGTGCACCCCGGTCCAGCTGGAGATCCTCAGGCGCGCGGGGGCTATGCCCATTTCCTCGAGACGCTGCGGGATGATTACAAAGCGAGAGGCCGAGAGGCTCTGCAAATCGTTCCTGGGCGCCCACAGCCCGCCGAAATTACCAGAAAATTTCGCTTTTGACGTGTCGCACGAATGCGCGTGGGGCAGCCGGGGCAATTTCATCCCTGCTAGGTACAACAGCTCGAGAGCCAAGTGTATTAAGTGTTCATTCTGCAACATGTATTTTTCTCCAAATAAGTTCATATTTCACTCTCACCGCACGCCAGAATCCAAATACACACAGCCCGACGCGGCAAACTTCAATTCTTGGAGAAGACACTTAAAACTCAGCGATAAGAACTCATCGGACGACGTGATCCACGCCTGGGAAGATGTCAAGGCCATGTTTAACGGTGGCAGCCGCAAGAGGACGCTGCCAATCGGTCGGTCTGAAAGTTCGCCTTCGCAACCACCCAGAGGTCAGACCCAAGGGGAACCGTCCGATGTGCCGCACAAAACTCTCCGCTGTGAGGATGACAGGGTGAACGTGACTATGCCGAGCAGCATCCGCAGTTACCCAGTTATCCCAGTGCCCAGTAAGAGTTTTGGGATGTTACAGAAAATACCACCACCGCTATTTCCGCATCCATACGGTTTCCCGGCGTTTGGATTGTGTCAAAAGAAGGATGACGGTGAGGTGATGGGAGAGCCAAACAAAACAAACCTGTCAGGTGTGTTTTGGCCGAGCCCTAAGGACAGTGCCTATACTTCTTTCCCCATGTTTTGGCCTACAACAGGCAGCTTGGCCATGCCAACGTACCACCATGCCCAACCTAAACCTCCATCTGACGTGTTATGCGCCAGACATAATGAGCTTGACGTGTCAGAGCAAAGTGACCGAAGCACAAGCACCCCTAAAGACAGTTTACTAGATAATGAACGGTGCTCGAGCACTCAGTCGACCCGCAACGAGGAGGATAAATCTGGGGACGAGAGCAGGTCGATAGAGGGAATTCCACCCACCTCGAGAAAAATAAGCTACATTTCTGCATTCAGGCCGGTTGTTAAAGATGTCGAGAGCATCGCAAAATTATACGGCAACAGAGGGCCGTACTCTGGCCCTCGGTCCGGCTACATGTCACCAGATTTTCTGAGTGAAAGTTCTAGTTACAGGTCAGTGTCTCCGGACGTGGACAGTGTGGATGATCCGGATGTGGATGTGGAGTCCCATAAGGCGCATGAGGATGAGGAGTGTCTGCAGCTCTCGGTGGATGACCGACGGAGTCCGCACAGTTTGACCCTAGCGCAGAGTGAAGGGGTTAAAGGGCAAGATCAAGAAAATACCCAGATGCACACCTTGAACGACCTACACTCGACGAATTCAAGCGAAACGCGGCCGTCTGATATGGAGAGCCACGGCAATAAACACACGACGCGCTTTGAAGTCTATGCGCGTGAAAGAGACGAGCACGTGCATCAAATGAGCACGTCTTATTTTGGTTCTGCGACCACTTACCAGCGCGAAACGAGTGTAAAAGATGTGCATGAAGAAGAGCCTTCTTCTACAGTAGAAGAGATGGAACCCAAAAATCATCAGgatgaaaataacatcagcgaggAGCGCCTGAAGGAACCAAATGATGtgtgtgcagATGAGGAAGCAATCTGCAAGGACACTGGCAACAGGGGCTCCTTGATTGAGAAAAACATAGAGAGCATGGCCAAAGagGAACTGCAGAAACAACTCGTGGAACAAGTCGAACTTAGAAAAAAGTTGGAGCGGGAGTTCCAGAATCTAAAAGACAGTTTTCAAGACCAAATGAAAAGGGAGCTTTCATACAGAGAGGAAATGGTGCAGCAGCTCCAGATTGTTCGAGCTCACGACGCACTACACCATTTTTCGTGTAAGATGCTGACTCCCCGTCACTGCACTGGGACCTGCACCTTCAAACCTCCCCTTTTACCGCCTTGATGGACACCCATTCAAGACATAGGTGTTCTTTAGAAATACTGCtgtgtcaaaaaaacaaaactttcttcCTCCCTCTGCAAAACACTGTCAACCTTTAGACCTGGAATAAGCAAGTGTGTACTGTAGTATTTTAGCTCTTACACTGTAATGAAGTCATTTTCATTCGCAAAGGAGTGTTTTCAGAGTCACTGTACGTattgtataatttatataaagtTCTAGAAAattgcattataaaaaaaaatgacgtCCCACTTAAATATGTTGTAGAAATCACTGGTATTAAGTGGCTATGTGCAATGCATATATTTGTTATGTATCCTGTGATACCTTTTTGTTGGTTTGTTAGTGATAGTTTAGGACATTAGATGCaacaataattaatgttttttgtatatttaatttatttcatgacCATGTTGGTTGTTTATTCCCATCTGCATATTTGTATATTATtgatgtaaagcactttaaattggcAGCCCTAACTACTGAAATGTGGATTAAATGATCTTGTTTGAGAGTCTGTCTTTTTCATCTGTTTCCCTAACACTGAACTATTTTTGAGTGTTTGTAGTCGTTATGACGTTGATGTCaagattttattttaggtttcttaataattttttaaatattcagaaattcaTGGAGCTGAGGATATCAATGTTATCAGAAACGTTATTATGTGTATGCATTTCAAAGTTTCTACTGTAATTTATGTCTATATACTAAATGTATAGATTTAATGATCTTTGATTGCTTTAATTGATAGGGTAAATGCATTAATGATCATTAGATAGTCCACATTTGTCTGTTTTAacactttgttttaaaaaatctacCTACCAGATTCCAATCTGTAATCTGTATTAGTTACTGCGTGAAATTTTATGGCGTTTACTGACAACTAAATTGAAAAGGAATATGACTGatgatttaaaccacactgaactgaactaaactgaacttcaactctgaaaactggactgacacattttcaatttactagaacctccatgttaagctgctttgacacagtctacactgtaaaagcgctatagaaatgagcatgaattgaattgaatacatttGAATGTAAGAAGGTGGGCAGAcgcatttttatatgtatttctgGTTAATTTCCc
>TCONS_00025474
CATGCAGTAGCTCTCGTATTAAAACTGTTGTTTCACATTAAACAGACCTTTTACAAGTAGTCTACTAGGTCGACTAATCTAAAGTGTTCCTAAATGCCACGCACGCCCCCGCACACACTGGCAGACAAGCAATCACTTTCGTGTGTTAAAAGATCACGTGGTGAACTTTAAACGTCTCCAGGCCTCAATGACAGCACTGACTGTCGTCCCCATTGGTCCCGAAGGCAAATAGTTAATGTAAATATGCTGGCGCTAAGTGGGAGTGCCTCGCCATTAGTTTAGCTGTCACTTGAGCACTGTCGAATGTCTTCAGTGGTTGTGTCGTTGAGGTCTGCACTAGCATGTGGTCAAGCCTCCGCGCGCGCCTCAACACTAGTCGCGGGAGAGCCGAGTACGATGCAAGTCCACGCGCACTGATAACAGGCCGGAGAGAAAACCGCTAAACTAGCGCTTGTGGACATTTTATATCAGATCGGCGGGATTCCAATGCGTCTGATTACAAAAAGGCTCTAACAGAGGACAGAAAGAGCGCGTTTTTCCGAAGGACTCGAAGGTTTCGAAGACGCGTTTTGCTCCGCAGATTAAAGACACAAAAGGCATCTTCTCAAAAAAAGATTTCCAGGAATGGAATCTATCCCAAATCAGCTGCCGGCTGGAAGAGACTCCAGCTGTTCGCCGAACTCTAAAGACTTGCAGTCTTACTCTGGCCCACCACTTAAGCCGAACCAAGTCAGTGAGACCTCTTTATACGGAATACCGATCGTTTCATTAGTCATAGACGGTCAAGAGAGACTTTGCCTAGCCCAAATATCCAACACTTTGTTGAAGAACTATAGCTATAACGAAATCCACAACCGGCGCGTGGCTCTGGGCATCACCTGTGTGCAGTGCACCCCGGTCCAGCTGGAGATCCTCAGGCGCGCGGGGGCTATGCCCATTTCCTCGAGACGCTGCGGGATGATTACAAAGCGAGAGGCCGAGAGGCTCTGCAAATCGTTCCTGGGCGCCCACAGCCCGCCGAAATTACCAGAAAATTTCGCTTTTGACGTGTCGCACGAATGCGCGTGGGGCAGCCGGGGCAATTTCATCCCTGCTAGGTACAACAGCTCGAGAGCCAAGTGTATTAAGTGTTCATTCTGCAACATGTATTTTTCTCCAAATAAGTTCATATTTCACTCTCACCGCACGCCAGAATCCAAATACACACAGCCCGACGCGGCAAACTTCAATTCTTGGAGAAGACACTTAAAACTCAGCGATAAGAACTCATCGGACGACGTGATCCACGCCTGGGAAGATGTCAAGGCCATGTTTAACGGTGGCAGCCGCAAGAGGACGCTGCCAATCGGTCGGTCTGAAAGTTCGCCTTCGCAACCACCCAGAGGTCAGACCCAAGGGGAACCGTCCGATGTGCCGCACAAAACTCTCCGCTGTGAGGATGACAGGGTGAACGTGACTATGCCGAGCAGCATCCGCAGTTACCCAGTTATCCCAGTGCCCAGTAAGAGTTTTGGGATGTTACAGAAAATACCACCACCGCTATTTCCGCATCCATACGGTTTCCCGGCGTTTGGATTGTGTCAAAAGAAGGATGACGGTGAGGTGATGGGAGAGCCAAACAAAACAAACCTGTCAGGTGTGTTTTGGCCGAGCCCTAAGGACAGTGCCTATACTTCTTTCCCCATGTTTTGGCCTACAACAGGCAGCTTGGCCATGCCAACGTACCACCATGCCCAACCTAAACCTCCATCTGACGTGTTATGCGCCAGACATAATGAGCTTGACGTGTCAGAGCAAAGTGACCGAAGCACAAGCACCCCTAAAGACAGTTTACTAGATAATGAACGGTGCTCGAGCACTCAGTCGACCCGCAACGAGGAGGATAAATCTGGGGACGAGAGCAGGTCGATAGAGGGAATTCCACCCACCTCGAGAAAAATAAGCTACATTTCTGCATTCAGGCCGGTTGTTAAAGATGTCGAGAGCATCGCAAAATTATACGGCAACAGAGGGCCGTACTCTGGCCCTCGGTCCGGCTACATGTCACCAGATTTTCTGAGTGAAAGTTCTAGTTACAGGTCAGTGTCTCCGGACGTGGACAGTGTGGATGATCCGGATGTGGATGTGGAGTCCCATAAGGCGCATGAGGATGAGGAGTGTCTGCAGCTCTCGGTGGATGACCGACGGAGTCCGCACAGTTTGACCCTAGCGCAGAGTGAAGGGGTTAAAGGGCAAGATCAAGAAAATACCCAGATGCACACCTTGAACGACCTACACTCGACGAATTCAAGCGAAACGCGGCCGTCTGATATGGAGAGCCACGGCAATAAACACACGACGCGCTTTGAAGTCTATGCGCGTGAAAGAGACGAGCACGTGCATCAAATGAGCACGTCTTATTTTGGTTCTGCGACCACTTACCAGCGCGAAACGAGTGTAAAAGATGTGCATGAAGAAGAGCCTTCTTCTACAGTAGAAGAGATGGAACCCAAAAATCATCAGgatgaaaataacatcagcgaggAGCGCCTGAAGGAACCAAATGATGtgtgtgcagATGAGGAAGCAATCTGCAAGGACACTGGCAACAGGGGCTCCTTGATTGAGAAAAACATAGAGAGCATGGCCAAAGagGAACTGCAGAAACAACTCGTGGAACAAGTCGAACTTAGAAAAAAGTTGGAGCGGGAGTTCCAGAATCTAAAAGACAGTTTTCAAGACCAAATGAAAAGGGAGCTTTCATACAGAGAGGAAATGGTGCAGCAGCTCCAGATTGTTCGAGGTAAGCGTTCGACTTCACACGACAGTGTTttgattgtatttaataaaacaatacaatgatCACTGGAGTTCAGAAGAGTCTTTTAGTTTTATACTAAATGTTATTAGTATGCTAAATACTAAATAGTATGctattaaacaaaaaagaaaggatGCATTCTGTATTGGTTTTTAGGAAAGTTGCATACTCAGCTTCTGAAGTGCAAACACTAGGATGACCCAAAATCCCTAAATAAACCTGTTACCAGCAAAATTATaaagcagggaaaataagtaatgaacacgtcatgtttttcgTGGGAATATTATTTcaaaaggagctgttgacatagaattgaaccagattttggtaaaaacccaaacaatacaaacataaaatgaaatgacacgaGGAGAAAATACTtaactactgaaacgtatttaatactttatataaaagtttttttttttggtgatggcagcttaaagattcttctcatgtggagaatgaagttacatgcattgctcaggtgtgagtttttcacatggttctgtgggtcttgccTATCAAATctaatctttaatttgtattttctattggattcaagtcaggtgtttggatgggccattctacagcttgattttttttctcttaagcATGCAAGAGTTTTCTTGCTGTGTTTCTGTTCATGGTCTTGCTAAAATTTCCAACCTGGTTCCATCTTAATCGTTCTGCTaatagatgttggactgaagcagctaatatttatcatttacactgacaaagggcagagggttgctgaagaattactgagagatttcagctgctgtctgggctttcactgcctttctacacctccatttcttcatgtgttcaatactttttccttgcgtcatttcattttattaggcataacttcatttgtgaaCGAATTAGTTTACATTAAATAAACCAATTTATTCCTTTTccttgcatatatggatttttttgggtgttatcaacatctggtgaaagtTTTAAGTAACAGGCACCTTTAGAATATCTGAGAAAAATGTGatgtattcaatacttattttcccctctGTTCTTGATCTCTCCTGCACAGACACTTACTGAGTTGACTGAGTTAAACCATAAGAGTTCATCAGTAATTAAAAAGTTATTGATTTGTGGCAAAGGCACTGTATTATTGGGTAATCTggtgtttatatattatttaaaagctATATTTGAGCTACAACTATTGTCTTCTAACacttctttttctccctctctcactatgttacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacattcaaatgaTGCCTTCTTTTTAAACGATTCATTCACTTTTTTCCCAGAAGCTCACGACGCACTACACCATTTTTCGTGTAAGATGCTGACTCCCCGTCACTGCACTGGGACCTGCACCTTCAAACCTCCCCTTTTACCGCCTTGATGGACACCCATTCAAGACATAGGTGTTCTTTAGAAATACTGCtgtgtcaaaaaaacaaaactttcttcCTCCCTCTGCAAAACACTGTCAACCTTTAGACCTGGAATAAGCAAGTGTGTACTGTAGTATTTTAGCTCTTACACTGTAATGAAGTCATTTTCATTCGCAAAGGAGTGTTTTCAGAGTCACTGTACGTattgtataatttatataaagtTCTAGAAAattgcattataaaaaaaaatgacgtCCCACTTAAATATGTTGTAGAAATCACTGGTATTAAGTGGCTATGTGCAATGCATATATTTGTTATGTATCCTGTGATACCTTTTTGTTGGTTTGTTAGTGATAGTTTAGGACATTAGATGCaacaataattaatgttttttgtatatttaatttatttcatgacCATGTTGGTTGTTTATTCCCATCTGCATATTTGTATATTATtgatgtaaagcactttaaattggcAGCCCTAACTACTGAAATGTGGATTAAATGATCTTGTTTGAGAGTCTGTCTTTTTCATCTGTTTCCCTAACACTGAACTATTTTTGAGTGTTTGTAGTCGTTATGACGTTGATGTCaagattttattttaggtttcttaataattttttaaatattcagaaattcaTGGAGCTGAGGATATCAATGTTATCAGAAACGTTATTATGTGTATGCATTTCAAAGTTTCTACTGTAATTTATGTCTATATACTAAATGTATAGATTTAATGATCTTTGATTGCTTTAATTGATAGGGTAAATGCATTAATGATCATTAGATAGTCCACATTTGTCTGTTTTAacactttgttttaaaaaatctacCTACCAGATTCCAATCTGTAATCTGTATTAGTTACTGCGTGAAATTTTATGGCGTTTACTGACAACTAAATTGAAAAGGAATATGACTGatgatttaaaccacactgaactgaactaaactgaacttcaactctgaaaactggactgacacattttcaatttactagaacctccatgttaagctgctttgacacagtctacactgtaaaagcgctatagaaatgagcatgaattgaattgaatacatttGAATGTAAGAAGGTGGGCAGAcgcatttttatatgtatttctgGTTAATTTCCc
>TCONS_00025473
CATGCAGTAGCTCTCGTATTAAAACTGTTGTTTCACATTAAACAGACCTTTTACAAGTAGTCTACTAGGTCGACTAATCTAAAGTGTTCCTAAATGCCACGCACGCCCCCGCACACACTGGCAGACAAGCAATCACTTTCGTGTGTTAAAAGATCACGTGGTGAACTTTAAACGTCTCCAGGCCTCAATGACAGCACTGACTGTCGTCCCCATTGGTCCCGAAGGCAAATAGTTAATGTAAATATGCTGGCGCTAAGTGGGAGTGCCTCGCCATTAGTTTAGCTGTCACTTGAGCACTGTCGAATGTCTTCAGTGGTTGTGTCGTTGAGGTCTGCACTAGCATGTGGTCAAGCCTCCGCGCGCGCCTCAACACTAGTCGCGGGAGAGCCGAGTACGATGCAAGTCCACGCGCACTGATAACAGGCCGGAGAGAAAACCGCTAAACTAGCGCTTGTGGACATTTTATATCAGATCGGCGGGATTCCAATGCGTCTGATTACAAAAAGGCTCTAACAGAGGACAGAAAGAGCGCGTTTTTCCGAAGGACTCGAAGGTTTCGAAGACGCGTTTTGCTCCGCAGATTAAAGACACAAAAGGCATCTTCTCAAAAAAAGATTTCCAGGAATGGAATCTATCCCAAATCAGCTGCCGGCTGGAAGAGACTCCAGCTGTTCGCCGAACTCTAAAGACTTGCAGTCTTACTCTGGCCCACCACTTAAGCCGAACCAAGTCAGTGAGACCTCTTTATACGGAATACCGATCGTTTCATTAGTCATAGACGGTCAAGAGAGACTTTGCCTAGCCCAAATATCCAACACTTTGTTGAAGAACTATAGCTATAACGAAATCCACAACCGGCGCGTGGCTCTGGGCATCACCTGTGTGCAGTGCACCCCGGTCCAGCTGGAGATCCTCAGGCGCGCGGGGGCTATGCCCATTTCCTCGAGACGCTGCGGGATGATTACAAAGCGAGAGGCCGAGAGGCTCTGCAAATCGTTCCTGGGCGCCCACAGCCCGCCGAAATTACCAGAAAATTTCGCTTTTGACGTGTCGCACGAATGCGCGTGGGGCAGCCGGGGCAATTTCATCCCTGCTAGGTACAACAGCTCGAGAGCCAAGTGTATTAAGTGTTCATTCTGCAACATGTATTTTTCTCCAAATAAGTTCATATTTCACTCTCACCGCACGCCAGAATCCAAATACACACAGCCCGACGCGGCAAACTTCAATTCTTGGAGAAGACACTTAAAACTCAGCGATAAGAACTCATCGGACGACGTGATCCACGCCTGGGAAGATGTCAAGGCCATGTTTAACGGTGGCAGCCGCAAGAGGACGCTGCCAATCGGTCGGTCTGAAAGTTCGCCTTCGCAACCACCCAGAGGTCAGACCCAAGGGGAACCGTCCGATGTGCCGCACAAAACTCTCCGCTGTGAGGATGACAGGGTGAACGTGACTATGCCGAGCAGCATCCGCAGTTACCCAGTTATCCCAGTGCCCAGTAAGAGTTTTGGGATGTTACAGAAAATACCACCACCGCTATTTCCGCATCCATACGGTTTCCCGGCGTTTGGATTGTGTCAAAAGAAGGATGACGGTGAGGTGATGGGAGAGCCAAACAAAACAAACCTGTCAGGTGTGTTTTGGCCGAGCCCTAAGGACAGTGCCTATACTTCTTTCCCCATGTTTTGGCCTACAACAGGCAGCTTGGCCATGCCAACGTACCACCATGCCCAACCTAAACCTCCATCTGACGTGTTATGCGCCAGACATAATGAGCTTGACGTGTCAGAGCAAAGTGACCGAAGCACAAGCACCCCTAAAGACAGTTTACTAGATAATGAACGGTGCTCGAGCACTCAGTCGACCCGCAACGAGGAGGATAAATCTGGGGACGAGAGCAGGTCGATAGAGGGAATTCCACCCACCTCGAGAAAAATAAGCTACATTTCTGCATTCAGGCCGGTTGTTAAAGATGTCGAGAGCATCGCAAAATTATACGGCAACAGAGGGCCGTACTCTGGCCCTCGGTCCGGCTACATGTCACCAGATTTTCTGAGTGAAAGTTCTAGTTACAGGTCAGTGTCTCCGGACGTGGACAGTGTGGATGATCCGGATGTGGATGTGGAGTCCCATAAGGCGCATGAGGATGAGGAGTGTCTGCAGCTCTCGGTGGATGACCGACGGAGTCCGCACAGTTTGACCCTAGCGCAGAGTGAAGGGGTTAAAGGGCAAGATCAAGAAAATACCCAGATGCACACCTTGAACGACCTACACTCGACGAATTCAAGCGAAACGCGGCCGTCTGATATGGAGAGCCACGGCAATAAACACACGACGCGCTTTGAAGTCTATGCGCGTGAAAGAGACGAGCACGTGCATCAAATGAGCACGTCTTATTTTGGTTCTGCGACCACTTACCAGCGCGAAACGAGTGTAAAAGATGTGCATGAAGAAGAGCCTTCTTCTACAGTAGAAGAGATGGAACCCAAAAATCATCAGgatgaaaataacatcagcgaggAGCGCCTGAAGGAACCAAATGATGtgtgtgcagATGAGGAAGCAATCTGCAAGGACACTGGCAACAGGGGCTCCTTGATTGAGAAAAACATAGAGAGCATGGCCAAAGagGAACTGCAGAAACAACTCGTGGAACAAGTCGAACTTAGAAAAAAGTTGGAGCGGGAGTTCCAGAATCTAAAAGACAGTTTTCAAGACCAAATGAAAAGGGAGCTTTCATACAGAGAGGAAATGGTGCAGCAGCTCCAGATTGTTCGAGCTCACGACGCACTACACCATTTTTCGTGTAAGATGCTGACTCCCCGTCACTGCACTGGGACCTGCACCTTCAAACCTCCCCTTTTACCGCCTTGATGGACACCCATTCAAGACATAGGTGTTCTTTAGAAATACTGCtgtgtcaaaaaaacaaaactttcttcCTCCCTCTGCAAAACACTGTCAACCTTTAGACCTGGAATAAGCAAGTGTGTACTGTAGTATTTTAGCTCTTACACTGTAATGAAGTCATTTTCATTCGCAAAGGAGTGTTTTCAGAGTCACTGTACGTattgtataatttatataaagtTCTAGAAAattgcattataaaaaaaaatgacgtCCCACTTAAATATGTTGTAGAAATCACTGGTATTAAGTGGCTATGTGCAATGCATATATTTGTTATGTATCCTGTGATACCTTTTTGTTGGTTTGTTAGTGATAGTTTAGGACATTAGATGCaacaataattaatgttttttgtatatttaatttatttcatgacCATGTTGGTTGTTTATTCCCATCTGCATATTTGTATATTATtgatgtaaagcactttaaattggcAGCCCTAACTACTGAAATGTGGATTAAATGATCTTGTTTGAGAGTCTGTCTTTTTCATCTGTTTCCCTAACACTGAACTATTTTTGAGTGTTTGTAGTCGTTATGACGTTGATGTCaagattttattttaggtttcttaataattttttaaatattcagaaattcaTGGAGCTGAGGATATCAATGTTATCAGAAACGTTATTATGTGTATGCATTTCAAAGTTTCTACTGTAATTTATGTCTATATACTAAATGTATAGATTTAATGATCTTTGATTGCTTTAATTGATAGGGTAAATGCATTAATGATCATTAGATAGTCCACATTTGTCTGTTTTAacactttgttttaaaaaatctacCTACCAGATTCCAATCTGTAATCTGTATTAGTTACTGCGTGAAATTTTATGGCGTTTACTGACAACTAAATTGAAAAGGAATATGACTGatgatttaaaccacactgaactgaactaaactgaacttcaactctgaaaactggactgacacattttcaatttactagaacctccatgttaagctgctttgacacagtctacactgtaaaagcgctatagaaatgagcatgaattgaattgaatacatttGAATGTAAGAAGGTGGGCAGAcgcatttttatatgtatttctgGTTAATTTCCc
>TCONS_00025475
ATGGAATCTATCCCAAATCAGCTGCCGGCTGGAAGAGACTCCAGCTGTTCGCCGAACTCTAAAGACTTGCAGTCTTACTCTGGCCCACCACTTAAGCCGAACCAAGTCAGTGAGACCTCTTTATACGGAATACCGATCGTTTCATTAGTCATAGACGGTCAAGAGAGACTTTGCCTAGCCCAAATATCCAACACTTTGTTGAAGAACTATAGCTATAACGAAATCCACAACCGGCGCGTGGCTCTGGGCATCACCTGTGTGCAGTGCACCCCGGTCCAGCTGGAGATCCTCAGGCGCGCGGGGGCTATGCCCATTTCCTCGAGACGCTGCGGGATGATTACAAAGCGAGAGGCCGAGAGGCTCTGCAAATCGTTCCTGGGCGCCCACAGCCCGCCGAAATTACCAGAAAATTTCGCTTTTGACGTGTCGCACGAATGCGCGTGGGGCAGCCGGGGCAATTTCATCCCTGCTAGGTACAACAGCTCGAGAGCCAAGTGTATTAAGTGTTCATTCTGCAACATGTATTTTTCTCCAAATAAGTTCATATTTCACTCTCACCGCACGCCAGAATCCAAATACACACAGCCCGACGCGGCAAACTTCAATTCTTGGAGAAGACACTTAAAACTCAGCGATAAGAACTCATCGGACGACGTGATCCACGCCTGGGAAGATGTCAAGGCCATGTTTAACGGTGGCAGCCGCAAGAGGACGCTGCCAATCGGTCGGTCTGAAAGTTCGCCTTCGCAACCACCCAGAGGTCAGACCCAAGGGGAACCGTCCGATGTGCCGCACAAAACTCTCCGCTGTGAGGATGACAGGGTGAACGTGACTATGCCGAGCAGCATCCGCAGTTACCCAGTTATCCCAGTGCCCAGTAAGAGTTTTGGGATGTTACAGAAAATACCACCACCGCTATTTCCGCATCCATACGGTTTCCCGGCGTTTGGATTGTGTCAAAAGAAGGATGACGGTGAGGTGATGGGAGAGCCAAACAAAACAAACCTGTCAGGTGTGTTTTGGCCGAGCCCTAAGGACAGTGCCTATACTTCTTTCCCCATGTTTTGGCCTACAACAGGCAGCTTGGCCATGCCAACGTACCACCATGCCCAACCTAAACCTCCATCTGACGTGTTATGCGCCAGACATAATGAGCTTGACGTGTCAGAGCAAAGTGACCGAAGCACAAGCACCCCTAAAGACAGTTTACTAGATAATGAACGGTGCTCGAGCACTCAGTCGACCCGCAACGAGGAGGATAAATCTGGGGACGAGAGCAGGTCGATAGAGGGAATTCCACCCACCTCGAGAAAAATAAGCTACATTTCTGCATTCAGGCCGGTTGTTAAAGATGTCGAGAGCATCGCAAAATTATACGGCAACAGAGGGCCGTACTCTGGCCCTCGGTCCGGCTACATGTCACCAGATTTTCTGAGTGAAAGTTCTAGTTACAGGTCAGTGTCTCCGGACGTGGACAGTGTGGATGATCCGGATGTGGATGTGGAGTCCCATAAGGCGCATGAGGATGAGGAGTGTCTGCAGCTCTCGGTGGATGACCGACGGAGTCCGCACAGTTTGACCCTAGCGCAGAGTGAAGGGGTTAAAGGGCAAGATCAAGAAAATACCCAGATGCACACCTTGAACGACCTACACTCGACGAATTCAAGCGAAACGCGGCCGTCTGATATGGAGAGCCACGGCAATAAACACACGACGCGCTTTGAAGTCTATGCGCGTGAAAGAGACGAGCACGTGCATCAAATGAGCACGTCTTATTTTGGTTCTGCGACCACTTACCAGCGCGAAACGAGTGTAAAAGATGTGCATGAAGAAGAGCCTTCTTCTACAGTAGAAGAGATGGAACCCAAAAATCATCAGgatgaaaataacatcagcgaggAGCGCCTGAAGGAACCAAATGATGtgtgtgcagATGAGGAAGCAATCTGCAAGGACACTGGCAACAGGGGCTCCTTGATTGAGAAAAACATAGAGAGCATGGCCAAAGagGAACTGCAGAAACAACTCGTGGAACAAGTCGAACTTAGAAAAAAGTTGGAGCGGGAGTTCCAGAATCTAAAAGACAGTTTTCAAGACCAAATGAAAAGGGAGCTTTCATACAGAGAGGAAATGGTGCAGCAGCTCCAGATTGTTCGAGAAGCTCACGACGCACTACACCATTTTTCGTGTAAGATGCTGACTCCCCGTCACTGCACTGGGACCTGCACCTTCAAACCTCCCCTTTTACCGCCTTGA

Function

symbol description
skor1b Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific; RNA polymerase II cis-regulatory region sequence-specific DNA binding activity; and SMAD binding activity. Predicted to be involved in negative regulation of BMP signaling pathway and negative regulation of transcription by RNA polymerase II. Predicted to be part of transcription regulator complex. Predicted to be active in nucleus. Is expressed in Purkinje cell. Orthologous to human SKOR1 (SKI family transcriptional corepressor 1).

GO:

id name namespace
GO:0000122 negative regulation of transcription by RNA polymerase II biological_process
GO:0030514 negative regulation of BMP signaling pathway biological_process
GO:0005634 nucleus cellular_component
GO:0005667 transcription regulator complex cellular_component
GO:0046332 SMAD binding molecular_function
GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding molecular_function
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050419-82 Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific; RNA polymerase II cis-regulatory region sequence-specific DNA binding activity; and SMAD binding activity. Predicted to be involved in negative regulation of BMP signaling pathway and negative regulation of transcription by RNA polymerase II. Predicted to be part of transcription regulator complex. Predicted to be active in nucleus. Is expressed in Purkinje cell. Orthologous to human SKOR1 (SKI family transcriptional corepressor 1).

Ensembl:

ensembl_id ENSDARG00000062448

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00025472 False 3629 mRNA 0.43 8 19972853 19982654
TCONS_00025474 False 5406 mRNA 0.42 7 19974289 19982654
TCONS_00025473 False 4022 mRNA 0.45 8 19974289 19982654
TCONS_00025475 True 2256 mRNA 0.51 7 19975787 19981509

Neighbor

gene id symbol gene type direction distance location
XLOC_012763 C18H15orf61 coding upstream 86109 19883325 ~ 19886744 (+)
XLOC_012762 iqch coding upstream 91919 19820008 ~ 19880934 (+)
XLOC_012761 smad3b coding upstream 166644 19772874 ~ 19806209 (+)
XLOC_012760 smad6b coding upstream 273792 19648275 ~ 19699061 (+)
XLOC_012759 NA coding upstream 351900 19524841 ~ 19620953 (+)
XLOC_012765 pias1b coding downstream 7758 19990412 ~ 20025364 (+)
XLOC_012766 rxfp3.3a3 coding downstream 48392 20031046 ~ 20032089 (+)
XLOC_012767 morf4l1 coding downstream 51369 20034023 ~ 20045307 (+)
XLOC_012768 uacaa coding downstream 64720 20047374 ~ 20082877 (+)
XLOC_012769 BX890624.2 coding downstream 106727 20089381 ~ 20208129 (+)
XLOC_012756 NA non-coding upstream 556813 19413097 ~ 19416040 (+)
XLOC_012752 BX548060.1 non-coding upstream 939640 19025989 ~ 19033213 (+)
XLOC_012749 NA non-coding upstream 1003087 18968890 ~ 18969766 (+)
XLOC_012748 BX571681.4 non-coding upstream 1061238 18910366 ~ 18911615 (+)
XLOC_012771 NA non-coding downstream 333789 20316443 ~ 20325221 (+)
XLOC_012772 NA non-coding downstream 345465 20328119 ~ 20376935 (+)
XLOC_012781 BX548061.1 non-coding downstream 1039045 21021699 ~ 21023601 (+)
XLOC_012786 NA non-coding downstream 1180770 21163424 ~ 21169748 (+)

Expression


Co-expression Network