XLOC_012768 (uacaa)


Basic Information

Item Value
gene id XLOC_012768
gene name uacaa
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 20047374 ~ 20082877 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00025480
GCACTGGTTGGGCGTTGTTACTGTTAAACTGGAACTATGAAAAGTTTCAAACAACGGCTTAAGAAAAACGAGAGTACAGAATGGGGAAAGTATGATGAGCGTCTGTTGAAGGCAGCAGAGACTGGCGATATAGAGAAACTCACAGCCACACTCAAGAAAGGAGCCAACCCCACCAAACTAGACCCAGAGGGCCATTCTGTGTTTCATGTTGCTGCTGGAAAAGGCCTCATTAATAGTCTTAATGTTTTTCTGGATAATGAAGTCGATGTGAAGGCTGTAGATGCTGCCGGCAAAACAGCTCTTCATCTGGCTGCAGCCGGCGgtcactctgtgtgtgtgcagaGTCTGCTGCAGAGTAAATGTCCTGTTGACAGTATAGACCTGCAGGGGCGTACAGCTTTGCATGATGCAGCATATCTAGGCTGCAAAGCTACCATCAAAGTGCTCTGTGACAGCGGCGCATCTGTTGATGCTGTTGATGCAGATGGTCGATCACCTTTATTGCTTGCGGCTAAGATGAGCCAACCAGCAGCCTGCCAGATACTCATTCAGTATGGTGCTCGCACCGTTGTCCGAGACAAGCAAAACAAGACTGCGCTAATCTTAGCTTGTGAGAACTCCTGTAAAGAAGCGGTGGAGATAATCCTGAAGACTAAGGCTGATGTTTTTGCTATGGATGTTCATGGGCATGACGCCTATCACTATGCCAGAAAAAGCCAGAAACAGGACTTGATCACACttgtccaacatgcactggaaagtGCAAAAGCTAAAGACATTGGCAGTTCACAGAGGACTACACAGGCTAAACCCCCACCGGCAGGGATTGGCTGGACCAAAGCAGGATCAGTAAAGGCAGAAAAAGTTTTATCAGAGCCCGTAACAGTCAGGCCCCCACAGTCGGCTCCAGCACCCGTGAGATCTGCCCCGATGGAGTTATTGCCCGGCGAGGTGGAGGCCCTCAGGAGAGAACTACGAGATGCTAGACGAAGACAAGAAGCAGCAGAGGCTGAGGTGCACAAGCTGGATGCGGCACTAGCTCTGCGGGCTCAGGAATATGAAGCACTGAGAAGATCCAGCGAACAAGCTCTTCACGCATCCCACAACAGAGCATGGGAGCTGGAGGAGGCATTGGGTGAGGTTCAGAGAAGGATGGCAGGATCAGAATCCCGCGTCAGGCAAATGCAAGCTCATCTAATGGCCGTCAGAGAGCACTTGGTGGAGGAGCTGAGAGTCCAGCTTCATGAGGTTAAAGGTCAGCGGGAGGCAGCCGTAGCCGAACTGGGAAGAATGCAAAAGGAGCTCCATCAAAGCAGGAGGGATGTGGAGAAGCAGAAGGAGAATCAGAACTCCTTGATGCAGGAACTCAGCCGGCTTTCTCAGGAGCTGCTCAGTAGGGAAGAGCTAATAAACACATTGAGAACCAGGCTAGCAGATATAGAGACCAACCATGCAGAGATGTTTTGTAAAGAAGCTCAGACTCCATCAGAATGGTGCAGTAAACATGAAAAGAGCACCATCACCGAGACGTGTGGAGATAATGTTGATCTGGAGAACTACATTAGCAAGGACGAGCATGCAGTTATAGCTAGCTCGCTGAGTGATGCACTGAAACAGGTTGAAACCAAAGCCAACGAGGCTCTACTGAAGCACCAGTGCATTCTGGAGGAGAACCAGAGCTTGTTGACAGAACTTCAAGAGCAAAAATTAGAACTGGATACTATTCAGGAGGCTCTGCAGGCTAGGTTTGTTCCTGCTGCCATAGTGGAGGAAAAGGAAAAAGAGGTAGAGCAACTCAAAGTGGCTCTGGCAGAGATGGAGAGGAGACCAAACAAAGTCCCAAACACTAAAGAAGAGGGCGTTCAGACTGAAGAACAGAGGTCATGCTCTAGTGAGGTGCAGCATAACCAAGTGTCATCGTCTAGTGAGAGTATCAGAGCACAGGCTGAAGACGCTGGATCTGCAGGGGAAAATGTGAAGAAAACTGAAATTGAAAGCAAATGTCACACAGCTGTGAATCAGGAGAGCACATCATCTGATCATGTGTGTGAGGGGTCAGTGTTGGAGCATGAGGGTCAAATGTTGGCTCAGGTCAGCATATCTTCCTCCATCAGTTCCTGTGAAGCATCACAGTCTGACAGCTCTCTGCAGGCTCAGGTCTACAGCCTACAAAAACAGCTAGAGGAGTCTGGGAGGCATTACAGACATGTGCTTTCAGTATACAGAACACGGTTGCTCAGTGCAGCACAGGGTTACATGGATGAAGAGGCAAGAGTGGCTCTGCTTCAGATCGCTAAAATGAGGGAGGAGTGTGTGTGCTGA

Function

symbol description
uacaa Predicted to be involved in negative regulation of NIK/NF-kappaB signaling and positive regulation of cysteine-type endopeptidase activity involved in apoptotic process. Predicted to act upstream of or within apoptotic signaling pathway and regulation of NIK/NF-kappaB signaling. Predicted to be active in cytosol and nucleus. Orthologous to human UACA (uveal autoantigen with coiled-coil domains and ankyrin repeats).

GO:

id name namespace
GO:0043280 positive regulation of cysteine-type endopeptidase activity involved in apoptotic process biological_process
GO:0097190 apoptotic signaling pathway biological_process
GO:1901222 regulation of NIK/NF-kappaB signaling biological_process
GO:1901223 negative regulation of NIK/NF-kappaB signaling biological_process
GO:0005829 cytosol cellular_component
GO:0005634 nucleus cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-050419-37 Predicted to be involved in negative regulation of NIK/NF-kappaB signaling and positive regulation of cysteine-type endopeptidase activity involved in apoptotic process. Predicted to act upstream of or within apoptotic signaling pathway and regulation of NIK/NF-kappaB signaling. Predicted to be active in cytosol and nucleus. Orthologous to human UACA (uveal autoantigen with coiled-coil domains and ankyrin repeats).

Ensembl:

ensembl_id ENSDARG00000069250

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00025480 True 2322 mRNA 0.49 14 20047374 20082877

Neighbor

gene id symbol gene type direction distance location
XLOC_012767 morf4l1 coding upstream 2067 20034023 ~ 20045307 (+)
XLOC_012766 rxfp3.3a3 coding upstream 15285 20031046 ~ 20032089 (+)
XLOC_012765 pias1b coding upstream 22010 19990412 ~ 20025364 (+)
XLOC_012764 skor1b coding upstream 64720 19972853 ~ 19982654 (+)
XLOC_012763 C18H15orf61 coding upstream 160630 19883325 ~ 19886744 (+)
XLOC_012769 BX890624.2 coding downstream 6504 20089381 ~ 20208129 (+)
XLOC_012770 tle3a coding downstream 143084 20225961 ~ 20257511 (+)
XLOC_012771 NA coding downstream 233566 20316443 ~ 20325221 (+)
XLOC_012772 NA coding downstream 245242 20328119 ~ 20376935 (+)
XLOC_012773 ddb2 coding downstream 385280 20468157 ~ 20492059 (+)
XLOC_012759 NA non-coding upstream 426421 19524841 ~ 19620953 (+)
XLOC_012756 NA non-coding upstream 631334 19413097 ~ 19416040 (+)
XLOC_012752 BX548060.1 non-coding upstream 1014161 19025989 ~ 19033213 (+)
XLOC_012749 NA non-coding upstream 1077608 18968890 ~ 18969766 (+)
XLOC_012748 BX571681.4 non-coding upstream 1135759 18910366 ~ 18911615 (+)
XLOC_012781 BX548061.1 non-coding downstream 938822 21021699 ~ 21023601 (+)
XLOC_012786 NA non-coding downstream 1080547 21163424 ~ 21169748 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000013_04186280_04202524 NA coding CI01000013 null 4185536 ~ 4202524 (-)