Gene
RNA
| Item | Value |
|---|---|
| gene id | G433539 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000306 |
| NCBI id | null |
| chromosome length | 11491657 |
| location | 5497974 ~ 5498184 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU497777 | True | 211 | lncRNA | 0.37 | 1 | 5497974 | 5498184 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000306_05476895_05478400 | NR0B1 | coding | downstream | 19409 | 5476396 ~ 5478565 (-) |
| CI01000306_05452986_05453456 | RPL22 | coding | downstream | 44518 | 5452864 ~ 5453456 (-) |
| CI01000306_05414347_05434965 | CHD5 | coding | downstream | 63009 | 5414271 ~ 5434965 (-) |
| CI01000306_05250669_05357112 | ARHGEF10L, ARHGEF10LA | coding | downstream | 140862 | 5250669 ~ 5357112 (-) |
| CI01000306_05007257_05008896 | NA | coding | downstream | 489078 | 5006631 ~ 5008896 (-) |
| CI01000306_05506906_05508492 | NA | coding | upstream | 8480 | 5506132 ~ 5508657 (-) |
| CI01000306_05520026_05523437 | PLEKHA3 | coding | upstream | 21808 | 5519992 ~ 5523437 (-) |
| CI01000306_05544881_05552941 | CYBB, GP91PHOX | coding | upstream | 46328 | 5544512 ~ 5552941 (-) |
| CI01000306_05555926_05562924 | XK | coding | upstream | 57742 | 5555926 ~ 5562949 (-) |
| CI01000306_05606914_05611346 | FIGF, VEGFD | coding | upstream | 108421 | 5606605 ~ 5611346 (-) |
| G433536 | NA | non-coding | downstream | 6818 | 5490935 ~ 5491156 (-) |
| G433532 | NA | non-coding | downstream | 22569 | 5475121 ~ 5475405 (-) |
| G433504 | NA | non-coding | downstream | 36223 | 5461533 ~ 5461751 (-) |
| G433487 | NA | non-coding | downstream | 175703 | 5322024 ~ 5322271 (-) |
| G433486 | NA | non-coding | downstream | 177695 | 5319625 ~ 5320279 (-) |
| G433541 | NA | non-coding | upstream | 1157 | 5499341 ~ 5499574 (-) |
| G433527 | NA | non-coding | upstream | 19646 | 5517830 ~ 5518379 (-) |
| G433550 | NA | non-coding | upstream | 26984 | 5525168 ~ 5526352 (-) |
| G433518 | NA | non-coding | upstream | 65234 | 5563418 ~ 5563669 (-) |
| G433450 | NA | other | downstream | 114211 | 5361643 ~ 5383763 (-) |
| CI01000306_04544349_04545034 | NA | other | downstream | 952882 | 4542723 ~ 4545244 (-) |
| G432022 | NA | other | downstream | 2494083 | 3000236 ~ 3003891 (-) |
| CI01000306_01723684_01726043 | MAFGA, MAFGB, MAFG | other | downstream | 3749024 | 1717933 ~ 1726043 (-) |
| G431814 | NA | other | downstream | 4185540 | 1311702 ~ 1312434 (-) |
| G433670 | NA | other | upstream | 542830 | 6041014 ~ 6041283 (-) |
| G433985 | NA | other | upstream | 697923 | 6196107 ~ 6197210 (-) |
| G434016 | NA | other | upstream | 856996 | 6355180 ~ 6361643 (-) |
| G434086 | NA | other | upstream | 939222 | 6437406 ~ 6452251 (-) |
| G434338 | NA | other | upstream | 1368472 | 6866656 ~ 6866936 (-) |
