G436933


Basic Information

Item Value
gene id G436933
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 11124584 ~ 11125281 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU501506
TGACCATTCTAGGACCATTATGATTATTGGCATTGTGACATTTATTTTCATGATGTCTGTTTCGGAGAAAAATCTGCTTACTGGTTATAATGCACAAATAGCAATCTGTAATCTTAATGGTTCTAAAAATTGTCTTAATTATTTGTCTTTATATAGAATAAAAAAATTCTTATGATATTTCTGGTACATATAAAATGTATCAAATCTATTATAAATCATCCAGAAAGACCAACTCATTGCAGCGTACTGTACCATTTTCACCAAACCTCATTTTTGTCATCTTGTCTTTTTTTAATTTATTGATCTGTTGTATCTATGTCAGAGCTGACGTGTGTCATTGTGAGCGTGTTTCCTGTGCTGTTCCTGATGTCACATTAGACGTAGTTCCTTTATGATTTTTATGTTGTTGCAGTAACAGAGAGTTGCCAGAGGCCCGATTGTTAACCCGTCAGTCCGTACCCAACAGCAAACTTCTGATTTGTACAGTTTTGTGATCAAAGATAAATTTTGTACAGTTTTTAGAAAGAAAACAAATGTAAATATCAGTAAAATGTATTTTACAAAAGAAAGGTGCAAAATACAAATGAACTGTATGAAAAAAGCCATTTTGTCTCAAATTCAGGGAAATATTTTGACCACATAACTATGAATAAAAAAATAAAAAAAACTCAATGACTTCGATATGAAGTATGACCTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU501506 True 698 lncRNA 0.31 1 11124584 11125281

Neighbor

gene id symbol gene type direction distance location
CI01000306_11107383_11122980 PER3 coding upstream 1209 11107299 ~ 11123375 (+)
CI01000306_11052174_11076357 CAMTA1 coding upstream 48088 11052174 ~ 11076496 (+)
CI01000306_10975455_10976511 NA coding upstream 147489 10971973 ~ 10978046 (+)
CI01000306_10775550_10815981 NA coding upstream 308508 10775346 ~ 10826963 (+)
CI01000306_10751001_10756733 NA coding upstream 367809 10750610 ~ 10756775 (+)
CI01000306_11139228_11152171 NA coding downstream 13947 11139228 ~ 11152218 (+)
CI01000306_11181222_11192574 NA coding downstream 55941 11181222 ~ 11192640 (+)
CI01000306_11202677_11210993 NA coding downstream 76328 11201609 ~ 11211208 (+)
CI01000306_11247260_11249148 NA coding downstream 121392 11246673 ~ 11249173 (+)
CI01000306_11345580_11366175 MMEL1 coding downstream 220013 11345294 ~ 11366235 (+)
G436987 NA non-coding upstream 95804 11028298 ~ 11028780 (+)
G436986 NA non-coding upstream 97223 11027056 ~ 11027361 (+)
G436985 NA non-coding upstream 98092 11026126 ~ 11026492 (+)
G436983 NA non-coding upstream 112586 11011724 ~ 11011998 (+)
G436960 NA non-coding upstream 126130 10990495 ~ 10998454 (+)
G436952 NA non-coding downstream 2274 11127555 ~ 11129064 (+)
G436994 NA non-coding downstream 38031 11163312 ~ 11164100 (+)
G436996 NA non-coding downstream 41508 11166789 ~ 11167002 (+)
G436995 NA non-coding downstream 43634 11168915 ~ 11171300 (+)
G436993 NA non-coding downstream 51112 11176393 ~ 11176864 (+)
G436932 NA other upstream 26208 11082988 ~ 11098376 (+)
CI01000306_09891658_09893015 SNRPE other upstream 1231345 9891532 ~ 9893239 (+)
G435639 NA other upstream 1239665 9878664 ~ 9884919 (+)
CI01000306_09860935_09865155 SH2D5 other upstream 1261395 9860480 ~ 9865724 (+)
G435590 NA other upstream 1387440 9704707 ~ 9737144 (+)
G437030 NA other downstream 144477 11269758 ~ 11271160 (+)

Expression


Co-expression Network